Experiment: Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02810 and HSERO_RS02815 are separated by 195 nucleotides HSERO_RS02815 and HSERO_RS02820 are separated by 60 nucleotides HSERO_RS02820 and HSERO_RS02825 are separated by 36 nucleotides HSERO_RS02825 and HSERO_RS02830 are separated by 375 nucleotides
HSERO_RS02810: HSERO_RS02810 - methyltransferase, at 617,928 to 618,605
_RS02810
HSERO_RS02815: HSERO_RS02815 - HxlR family transcriptional regulator, at 618,801 to 619,247
_RS02815
HSERO_RS02820: HSERO_RS02820 - membrane protein, at 619,308 to 620,522
_RS02820
HSERO_RS02825: HSERO_RS02825 - methyltransferase, at 620,559 to 621,131
_RS02825
HSERO_RS02830: HSERO_RS02830 - transcription regulator protein, at 621,507 to 621,905
_RS02830
Position (kb) 619
620
621 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 618.317 kb on + strand, within HSERO_RS02810 at 618.352 kb on - strand, within HSERO_RS02810 at 618.353 kb on - strand, within HSERO_RS02810 at 618.404 kb on + strand, within HSERO_RS02810 at 618.412 kb on - strand at 618.444 kb on + strand, within HSERO_RS02810 at 618.456 kb on + strand, within HSERO_RS02810 at 618.560 kb on - strand at 618.609 kb on + strand at 618.900 kb on + strand, within HSERO_RS02815 at 618.900 kb on + strand, within HSERO_RS02815 at 619.190 kb on + strand, within HSERO_RS02815 at 619.405 kb on + strand at 619.618 kb on + strand, within HSERO_RS02820 at 619.634 kb on + strand, within HSERO_RS02820 at 619.728 kb on + strand, within HSERO_RS02820 at 619.744 kb on + strand, within HSERO_RS02820 at 619.946 kb on + strand, within HSERO_RS02820 at 620.237 kb on + strand, within HSERO_RS02820 at 620.305 kb on - strand, within HSERO_RS02820 at 620.375 kb on - strand, within HSERO_RS02820 at 620.492 kb on + strand at 620.500 kb on - strand at 620.573 kb on + strand at 620.573 kb on + strand at 620.574 kb on - strand at 620.653 kb on + strand, within HSERO_RS02825 at 620.676 kb on + strand, within HSERO_RS02825 at 620.679 kb on + strand, within HSERO_RS02825 at 620.700 kb on - strand, within HSERO_RS02825 at 620.766 kb on - strand, within HSERO_RS02825 at 620.818 kb on + strand, within HSERO_RS02825 at 620.818 kb on + strand, within HSERO_RS02825 at 620.820 kb on + strand, within HSERO_RS02825 at 620.826 kb on - strand, within HSERO_RS02825 at 620.828 kb on - strand, within HSERO_RS02825 at 620.828 kb on - strand, within HSERO_RS02825 at 620.828 kb on - strand, within HSERO_RS02825 at 620.849 kb on + strand, within HSERO_RS02825 at 620.857 kb on + strand, within HSERO_RS02825 at 620.866 kb on + strand, within HSERO_RS02825 at 620.943 kb on + strand, within HSERO_RS02825 at 620.951 kb on - strand, within HSERO_RS02825 at 621.015 kb on - strand, within HSERO_RS02825 at 621.019 kb on + strand, within HSERO_RS02825 at 621.019 kb on + strand, within HSERO_RS02825 at 621.027 kb on - strand, within HSERO_RS02825 at 621.041 kb on - strand, within HSERO_RS02825 at 621.047 kb on + strand, within HSERO_RS02825 at 621.047 kb on + strand, within HSERO_RS02825 at 621.047 kb on + strand, within HSERO_RS02825 at 621.053 kb on - strand, within HSERO_RS02825 at 621.066 kb on + strand, within HSERO_RS02825 at 621.087 kb on + strand at 621.087 kb on + strand at 621.090 kb on - strand at 621.095 kb on - strand at 621.117 kb on + strand at 621.117 kb on + strand at 621.119 kb on + strand at 621.122 kb on - strand at 621.161 kb on - strand at 621.171 kb on + strand at 621.179 kb on - strand at 621.179 kb on - strand at 621.181 kb on + strand at 621.181 kb on + strand at 621.189 kb on - strand at 621.189 kb on - strand at 621.256 kb on - strand at 621.259 kb on + strand at 621.281 kb on - strand at 621.283 kb on + strand at 621.342 kb on + strand at 621.353 kb on + strand at 621.353 kb on + strand at 621.353 kb on + strand at 621.353 kb on + strand at 621.355 kb on + strand at 621.355 kb on + strand at 621.363 kb on + strand at 621.363 kb on + strand at 621.363 kb on + strand at 621.363 kb on - strand at 621.410 kb on + strand at 621.411 kb on + strand at 621.442 kb on + strand at 621.454 kb on + strand at 621.478 kb on - strand at 621.504 kb on + strand at 621.504 kb on + strand at 621.512 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB remove 618,317 + HSERO_RS02810 0.57 +0.4 618,352 - HSERO_RS02810 0.63 -0.1 618,353 - HSERO_RS02810 0.63 +1.2 618,404 + HSERO_RS02810 0.70 -0.7 618,412 - +0.3 618,444 + HSERO_RS02810 0.76 -0.2 618,456 + HSERO_RS02810 0.78 +1.8 618,560 - +1.3 618,609 + +1.1 618,900 + HSERO_RS02815 0.22 -1.9 618,900 + HSERO_RS02815 0.22 +0.1 619,190 + HSERO_RS02815 0.87 -0.6 619,405 + +2.3 619,618 + HSERO_RS02820 0.26 +1.0 619,634 + HSERO_RS02820 0.27 +0.8 619,728 + HSERO_RS02820 0.35 +1.1 619,744 + HSERO_RS02820 0.36 -0.3 619,946 + HSERO_RS02820 0.53 +0.3 620,237 + HSERO_RS02820 0.76 +1.0 620,305 - HSERO_RS02820 0.82 -0.3 620,375 - HSERO_RS02820 0.88 +0.2 620,492 + -0.6 620,500 - +0.3 620,573 + -0.4 620,573 + -1.1 620,574 - +0.6 620,653 + HSERO_RS02825 0.16 +1.0 620,676 + HSERO_RS02825 0.20 +0.4 620,679 + HSERO_RS02825 0.21 +0.9 620,700 - HSERO_RS02825 0.25 -0.1 620,766 - HSERO_RS02825 0.36 -0.1 620,818 + HSERO_RS02825 0.45 +0.8 620,818 + HSERO_RS02825 0.45 -1.0 620,820 + HSERO_RS02825 0.46 -0.2 620,826 - HSERO_RS02825 0.47 +0.5 620,828 - HSERO_RS02825 0.47 +0.2 620,828 - HSERO_RS02825 0.47 -0.1 620,828 - HSERO_RS02825 0.47 +0.7 620,849 + HSERO_RS02825 0.51 +0.2 620,857 + HSERO_RS02825 0.52 +0.4 620,866 + HSERO_RS02825 0.54 -0.1 620,943 + HSERO_RS02825 0.67 +0.4 620,951 - HSERO_RS02825 0.68 +0.8 621,015 - HSERO_RS02825 0.80 -1.9 621,019 + HSERO_RS02825 0.80 +0.3 621,019 + HSERO_RS02825 0.80 -0.5 621,027 - HSERO_RS02825 0.82 +0.9 621,041 - HSERO_RS02825 0.84 +1.1 621,047 + HSERO_RS02825 0.85 -0.2 621,047 + HSERO_RS02825 0.85 +0.1 621,047 + HSERO_RS02825 0.85 +1.8 621,053 - HSERO_RS02825 0.86 -0.8 621,066 + HSERO_RS02825 0.88 +0.2 621,087 + -1.0 621,087 + -0.2 621,090 - -0.2 621,095 - +0.9 621,117 + +0.5 621,117 + +0.7 621,119 + +0.9 621,122 - -0.6 621,161 - +0.5 621,171 + +1.0 621,179 - -0.3 621,179 - -3.0 621,181 + -0.0 621,181 + +0.6 621,189 - +0.6 621,189 - +0.5 621,256 - +1.1 621,259 + +0.6 621,281 - +0.0 621,283 + +0.3 621,342 + +0.4 621,353 + -0.1 621,353 + +0.4 621,353 + +0.5 621,353 + -1.2 621,355 + +0.2 621,355 + +0.0 621,363 + +0.0 621,363 + -0.1 621,363 + +1.3 621,363 - -0.2 621,410 + -0.2 621,411 + +0.4 621,442 + -0.3 621,454 + -0.1 621,478 - -0.1 621,504 + -0.6 621,504 + +0.1 621,512 - +1.5
Or see this region's nucleotide sequence