Experiment: Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS00355 and HSERO_RS00360 are separated by 187 nucleotides HSERO_RS00360 and HSERO_RS00365 are separated by 170 nucleotides HSERO_RS00365 and HSERO_RS00370 are separated by 134 nucleotides
HSERO_RS00355: HSERO_RS00355 - methyltransferase, at 85,184 to 86,503
_RS00355
HSERO_RS00360: HSERO_RS00360 - hypothetical protein, at 86,691 to 87,035
_RS00360
HSERO_RS00365: HSERO_RS00365 - membrane protein, at 87,206 to 87,751
_RS00365
HSERO_RS00370: HSERO_RS00370 - peptide transporter, at 87,886 to 89,892
_RS00370
Position (kb) 87
88 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 86.304 kb on - strand, within HSERO_RS00355 at 86.377 kb on - strand at 86.698 kb on + strand at 86.849 kb on - strand, within HSERO_RS00360 at 87.083 kb on + strand at 87.083 kb on + strand at 87.091 kb on - strand at 87.422 kb on - strand, within HSERO_RS00365 at 87.494 kb on - strand, within HSERO_RS00365 at 87.494 kb on - strand, within HSERO_RS00365 at 87.657 kb on + strand, within HSERO_RS00365 at 87.723 kb on + strand at 87.753 kb on + strand at 87.753 kb on + strand at 87.753 kb on + strand at 87.889 kb on - strand at 87.924 kb on - strand at 87.944 kb on - strand at 88.006 kb on + strand at 88.014 kb on - strand at 88.190 kb on + strand, within HSERO_RS00370 at 88.259 kb on - strand, within HSERO_RS00370 at 88.565 kb on + strand, within HSERO_RS00370 at 88.575 kb on + strand, within HSERO_RS00370 at 88.578 kb on - strand, within HSERO_RS00370 at 88.583 kb on - strand, within HSERO_RS00370 at 88.741 kb on + strand, within HSERO_RS00370
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB remove 86,304 - HSERO_RS00355 0.85 +1.4 86,377 - +0.4 86,698 + -1.5 86,849 - HSERO_RS00360 0.46 -0.5 87,083 + -0.4 87,083 + -0.9 87,091 - +0.3 87,422 - HSERO_RS00365 0.40 +0.7 87,494 - HSERO_RS00365 0.53 +2.9 87,494 - HSERO_RS00365 0.53 -0.1 87,657 + HSERO_RS00365 0.83 +0.5 87,723 + +0.1 87,753 + -0.9 87,753 + +0.2 87,753 + +0.2 87,889 - -0.0 87,924 - +0.3 87,944 - -2.5 88,006 + +0.1 88,014 - -0.9 88,190 + HSERO_RS00370 0.15 -0.8 88,259 - HSERO_RS00370 0.19 -0.6 88,565 + HSERO_RS00370 0.34 +0.5 88,575 + HSERO_RS00370 0.34 -0.3 88,578 - HSERO_RS00370 0.34 -1.1 88,583 - HSERO_RS00370 0.35 -3.4 88,741 + HSERO_RS00370 0.43 -0.6
Or see this region's nucleotide sequence