Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_16080

Experiment: 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine
3,636,496	+		AO356_16075	0.36	-1.1
3,636,496	+		AO356_16075	0.36	-0.1
3,636,497	-		AO356_16075	0.36	-1.7
3,636,497	-		AO356_16075	0.36	-1.7
3,636,625	-		AO356_16075	0.45	-1.7
3,636,938	-		AO356_16075	0.67	-2.1
3,637,127	-		AO356_16075	0.80	-2.7
3,637,127	-		AO356_16075	0.80	-1.7
3,637,177	+		AO356_16075	0.84	-2.1
3,637,333	+				-2.1
3,637,374	-				-2.7
3,637,538	+				-1.1
3,637,538	+				-0.1
3,637,539	-				-0.7
3,637,560	-				-0.5
3,638,540	+		AO356_16080	0.38	-1.7
3,638,541	-		AO356_16080	0.38	-0.1
3,638,585	+		AO356_16080	0.39	-0.7
3,638,585	+		AO356_16080	0.39	-1.1
3,638,585	+		AO356_16080	0.39	-1.7
3,638,585	+		AO356_16080	0.39	-2.4
3,638,585	+		AO356_16080	0.39	-2.1
3,638,585	+		AO356_16080	0.39	-2.1
3,638,585	+		AO356_16080	0.39	-3.3
3,638,585	+		AO356_16080	0.39	-1.1
3,638,586	-		AO356_16080	0.39	-1.7
3,638,586	-		AO356_16080	0.39	-2.4
3,638,586	-		AO356_16080	0.39	-1.1
3,638,586	-		AO356_16080	0.39	-1.7
3,638,586	-		AO356_16080	0.39	-1.7
3,638,586	-		AO356_16080	0.39	-0.1
3,638,586	-		AO356_16080	0.39	-0.7
3,638,586	-		AO356_16080	0.39	-1.7
3,638,586	-		AO356_16080	0.39	-0.4
3,638,586	-		AO356_16080	0.39	-1.4
3,638,586	-		AO356_16080	0.39	-1.9
3,638,586	-		AO356_16080	0.39	-2.4
3,638,586	-		AO356_16080	0.39	-2.4
3,638,607	-		AO356_16080	0.40	-0.7
3,638,607	-		AO356_16080	0.40	-1.1
3,638,607	-		AO356_16080	0.40	-1.1
3,638,607	-		AO356_16080	0.40	-1.1
3,638,607	-		AO356_16080	0.40	-2.8
3,638,607	-		AO356_16080	0.40	-2.7
3,638,703	-		AO356_16080	0.43	-2.1
3,638,729	+		AO356_16080	0.44	-1.1
3,638,730	-		AO356_16080	0.44	-2.1
3,638,730	-		AO356_16080	0.44	-1.7
3,638,730	-		AO356_16080	0.44	-3.1
3,638,730	-		AO356_16080	0.44	-3.1
3,638,968	-		AO356_16080	0.52	-2.7
3,638,993	+		AO356_16080	0.53	-1.7
3,638,993	+		AO356_16080	0.53	-1.1
3,638,993	+		AO356_16080	0.53	-1.7
3,638,993	+		AO356_16080	0.53	-0.5
3,638,993	+		AO356_16080	0.53	-2.4
3,638,994	-		AO356_16080	0.53	+0.8
3,638,994	-		AO356_16080	0.53	-4.2
3,638,994	-		AO356_16080	0.53	-2.1
3,639,016	-		AO356_16080	0.54	+0.2
3,639,017	+		AO356_16080	0.54	-1.1
3,639,017	+		AO356_16080	0.54	-1.1
3,639,017	+		AO356_16080	0.54	-1.1
3,639,017	+		AO356_16080	0.54	-2.7
3,639,018	-		AO356_16080	0.54	+1.3
3,639,018	-		AO356_16080	0.54	+0.4
3,639,018	-		AO356_16080	0.54	+0.1
3,639,018	-		AO356_16080	0.54	-0.1
3,639,018	-		AO356_16080	0.54	+0.1
3,639,018	-		AO356_16080	0.54	-0.1
3,639,018	-		AO356_16080	0.54	+0.5
3,639,018	-		AO356_16080	0.54	-0.0
3,639,018	-		AO356_16080	0.54	+0.0
3,639,033	+		AO356_16080	0.54	-2.1
3,639,125	+		AO356_16080	0.57	-2.4
3,639,125	+		AO356_16080	0.57	-1.7
3,639,125	+		AO356_16080	0.57	-2.4
3,639,125	+		AO356_16080	0.57	-2.1
3,639,126	-		AO356_16080	0.57	-0.4
3,639,126	-		AO356_16080	0.57	-1.4
3,639,126	-		AO356_16080	0.57	-1.9
3,639,126	-		AO356_16080	0.57	-2.6
3,639,126	-		AO356_16080	0.57	-2.1
3,639,126	-		AO356_16080	0.57	-2.6
3,639,126	-		AO356_16080	0.57	-2.1
3,639,222	-		AO356_16080	0.61	-4.5
3,639,222	-		AO356_16080	0.61	-1.9
3,639,287	+		AO356_16080	0.63	-1.7
3,639,288	-		AO356_16080	0.63	-2.2
3,639,288	-		AO356_16080	0.63	-1.0
3,639,288	-		AO356_16080	0.63	+0.3
3,639,314	+		AO356_16080	0.64	-3.1
3,639,315	-		AO356_16080	0.64	-2.0
3,639,407	+		AO356_16080	0.67	-1.1
3,639,407	+		AO356_16080	0.67	-0.1
3,639,408	-		AO356_16080	0.67	-1.1
3,639,611	+		AO356_16080	0.74	-1.1
3,639,611	+		AO356_16080	0.74	-0.1
3,639,611	+		AO356_16080	0.74	-0.1
3,639,611	+		AO356_16080	0.74	-2.4
3,639,611	+		AO356_16080	0.74	-1.1
3,639,611	+		AO356_16080	0.74	-0.1
3,639,611	+		AO356_16080	0.74	-1.1
3,639,611	+		AO356_16080	0.74	-0.7
3,639,611	+		AO356_16080	0.74	-1.1
3,639,611	+		AO356_16080	0.74	-2.4
3,639,611	+		AO356_16080	0.74	-1.7
3,639,611	+		AO356_16080	0.74	-0.1
3,639,612	-		AO356_16080	0.74	-3.3
3,639,612	-		AO356_16080	0.74	-2.9
3,639,612	-		AO356_16080	0.74	-1.9
3,639,612	-		AO356_16080	0.74	-3.7
3,639,612	-		AO356_16080	0.74	-1.4
3,639,612	-		AO356_16080	0.74	-2.3
3,639,612	-		AO356_16080	0.74	-1.1
3,639,612	-		AO356_16080	0.74	-2.8
3,639,612	-		AO356_16080	0.74	-2.8
3,639,761	+		AO356_16080	0.79	-1.7
3,639,770	+		AO356_16080	0.79	-1.1
3,639,770	+		AO356_16080	0.79	-1.1
3,639,771	-		AO356_16080	0.79	-1.7
3,639,771	-		AO356_16080	0.79	-1.7
3,639,976	+		AO356_16080	0.86	-2.1
3,639,976	+		AO356_16080	0.86	+0.9
3,639,977	-		AO356_16080	0.86	-0.1
3,639,977	-		AO356_16080	0.86	-1.4
3,639,977	-		AO356_16080	0.86	-2.2
3,640,091	+				-0.1
3,640,091	+				-1.4
3,640,092	-				-2.4
3,640,092	-				+0.7
3,640,092	-				-2.7
3,640,153	+				-1.7
3,640,182	-				-2.1
3,640,188	-				-1.4
3,640,193	+				-0.1
3,640,193	+				-1.7
3,640,193	+				-2.4
3,640,194	-				-1.1
3,640,194	-				-2.9
3,640,194	-				-0.1
3,640,214	+				-1.1
3,640,214	+				-1.7
3,640,214	+				-2.1
3,640,214	+				-3.1
3,640,214	+				-1.7
3,640,214	+				-1.3
3,640,214	+				-0.9
3,640,214	+				-2.1
3,640,214	+				+0.9
3,640,215	-				-3.3
3,640,215	-				-2.9
3,640,215	-				-2.0
3,640,235	+				-1.1
3,640,235	+				-1.7
3,640,235	+				-2.1
3,640,235	+				-1.1
3,640,236	-				-1.7
3,640,236	-				-2.7
3,640,236	-				-2.9
3,640,236	-				-2.7
3,640,236	-				-2.4
3,640,256	+				-1.7
3,640,256	+				+0.3
3,640,257	-				-2.4
3,640,257	-				-2.6
3,640,257	-				-0.1
3,640,257	-				-0.9
3,640,257	-				-1.7
3,640,257	-				-3.1
3,640,257	-				-2.1
3,640,257	-				-2.1
3,640,257	-				-1.9
3,640,337	+				-1.1
3,640,371	+				-1.1
3,640,440	+		AO356_16085	0.40	-0.9
3,640,440	+		AO356_16085	0.40	-1.9
3,640,441	-		AO356_16085	0.40	-0.7
3,640,503	+		AO356_16085	0.75	-1.8
3,640,503	+		AO356_16085	0.75	-0.1
3,640,503	+		AO356_16085	0.75	-2.1
3,640,503	+		AO356_16085	0.75	-2.9
3,640,503	+		AO356_16085	0.75	-0.1
3,640,504	-		AO356_16085	0.76	+0.0
3,640,504	-		AO356_16085	0.76	-1.3
3,640,504	-		AO356_16085	0.76	-0.3
3,640,504	-		AO356_16085	0.76	-0.9
3,640,514	+		AO356_16085	0.81	-0.1
3,640,536	+				+0.0
3,640,536	+				-1.7
3,640,536	+				-1.1
3,640,536	+				-2.1
3,640,536	+				-0.5
3,640,536	+				-0.1
3,640,537	-				-0.3
3,640,537	-				-0.9
3,640,537	-				+0.0
3,640,537	-				-0.0
3,640,537	-				-1.1
3,640,537	-				+0.1
3,640,540	+				-2.3
3,640,540	+				-1.3
3,640,540	+				-0.7
3,640,540	+				-1.1
3,640,540	+				-2.1
3,640,540	+				-3.7
3,640,540	+				-2.4
3,640,540	+				-0.5
3,640,540	+				+0.5
3,640,540	+				-0.3
3,640,540	+				-2.6
3,640,540	+				-2.2
3,640,540	+				-2.8
3,640,540	+				-0.1
3,640,540	+				-0.7
3,640,540	+				-1.5
3,640,540	+				-3.4
3,640,540	+				-1.6
3,640,540	+				-1.4
3,640,541	-				-0.1
3,640,541	-				+0.1
3,640,541	-				-0.1
3,640,541	-				+1.5
3,640,541	-				-0.6
3,640,541	-				+0.2
3,640,541	-				-1.1
3,640,541	-				+0.1
3,640,541	-				+0.2
3,640,541	-				+1.2
3,640,541	-				-0.1
3,640,541	-				+0.9
3,640,541	-				-0.1
3,640,541	-				-0.6
3,640,541	-				-0.8
3,640,541	-				+0.8
3,640,541	-				-0.5
3,640,541	-				-0.7
3,640,541	-				+0.7
3,640,541	-				-0.1
3,640,541	-				-0.2
3,640,541	-				-0.5
3,640,541	-				-0.1
3,640,541	-				+0.7
3,640,541	-				-0.1
3,640,542	+				-1.7
3,640,542	+				-0.1
3,640,542	+				+0.7
3,640,542	+				-0.9
3,640,542	+				-2.9
3,640,542	+				-1.7
3,640,542	+				-2.3
3,640,542	+				-0.7
3,640,542	+				-0.9
3,640,542	+				-2.4
3,640,542	+				-2.9
3,640,542	+				-0.7
3,640,542	+				-2.7
3,640,542	+				-0.3
3,640,542	+				-2.6
3,640,542	+				-1.3
3,640,542	+				-2.4
3,640,542	+				-0.6
3,640,542	+				-1.9
3,640,542	+				-0.5
3,640,542	+				-1.7
3,640,542	+				-1.9
3,640,542	+				-2.1
3,640,542	+				-0.9
3,640,542	+				-1.1
3,640,542	+				-2.4
3,640,542	+				-2.1
3,640,542	+				-0.5
3,640,542	+				-0.8
3,640,542	+				-0.1
3,640,542	+				-0.3
3,640,542	+				-1.7
3,640,542	+				-2.3
3,640,542	+				-0.9
3,640,542	+				-1.7
3,640,542	+				-0.9
3,640,542	+				-0.7
3,640,542	+				-1.3
3,640,542	+				-1.1
3,640,542	+				-2.1
3,640,542	+				-2.1
3,640,542	+				-3.7
3,640,542	+				-1.3
3,640,542	+				-0.1
3,640,543	-				-0.8
3,640,543	-				-0.8
3,640,543	-				+0.5
3,640,543	-				-1.3
3,640,543	-				-0.1
3,640,543	-				+0.3
3,640,543	-				-1.1
3,640,543	-				-1.7
3,640,543	-				-0.7
3,640,543	-				-0.8
3,640,543	-				-0.1
3,640,543	-				+1.5
3,640,543	-				+0.9
3,640,543	-				+0.4
3,640,543	-				+0.4
3,640,543	-				-0.2
3,640,543	-				+0.1
3,640,543	-				+0.8
3,640,543	-				+0.2
3,640,543	-				-0.1
3,640,543	-				-0.6
3,640,543	-				-0.1
3,640,543	-				-0.1
3,640,543	-				-0.2
3,640,543	-				-0.0
3,640,543	-				-0.3
3,640,543	-				-0.1
3,640,543	-				-1.4
3,640,543	-				+0.9
3,640,543	-				-0.3
3,640,543	-				-0.7
3,640,543	-				-1.2
3,640,543	-				-0.6
3,640,543	-				-0.5
3,640,543	-				-0.4
3,640,543	-				-1.1
3,640,543	-				-0.5
3,640,543	-				-0.1
3,640,543	-				-0.1
3,640,543	-				-0.5
3,640,543	-				+0.6
3,640,543	-				+0.5
3,640,543	-				-0.3
3,640,543	-				-2.3
3,640,558	+				-2.1
3,640,559	-				+0.2
3,640,559	-				-0.8
3,640,559	-				+0.0
3,640,559	-				-0.9
3,640,563	+				-0.1
3,640,630	+				+0.3
3,640,630	+				+0.6
3,640,630	+				+1.0
3,640,630	+				-1.1
3,640,631	-				-1.7
3,640,631	-				-0.9
3,640,631	-				-1.9
3,640,631	-				+0.4
3,640,631	-				-0.4
3,640,814	+		AO356_16090	0.22	-0.5
3,640,815	-		AO356_16090	0.22	-0.9
3,640,904	+		AO356_16090	0.32	+1.5
3,640,904	+		AO356_16090	0.32	-0.7
3,640,905	-		AO356_16090	0.32	-0.6
3,640,905	-		AO356_16090	0.32	-0.5
3,640,905	-		AO356_16090	0.32	-0.3
3,640,905	-		AO356_16090	0.32	-0.3
3,640,997	+		AO356_16090	0.42	+0.9
3,640,997	+		AO356_16090	0.42	-0.1
3,640,998	-		AO356_16090	0.42	-0.6
3,641,003	+		AO356_16090	0.43	+2.7
3,641,003	+		AO356_16090	0.43	-0.3
3,641,003	+		AO356_16090	0.43	+0.2
3,641,003	+		AO356_16090	0.43	-0.0
3,641,003	+		AO356_16090	0.43	+0.5
3,641,003	+		AO356_16090	0.43	+0.3
3,641,003	+		AO356_16090	0.43	-2.1
3,641,003	+		AO356_16090	0.43	+0.2
3,641,003	+		AO356_16090	0.43	-0.5
3,641,003	+		AO356_16090	0.43	-1.7
3,641,003	+		AO356_16090	0.43	-0.2
3,641,003	+		AO356_16090	0.43	+0.1
3,641,004	-		AO356_16090	0.43	+0.9
3,641,004	-		AO356_16090	0.43	+0.1
3,641,004	-		AO356_16090	0.43	+0.1
3,641,004	-		AO356_16090	0.43	-1.7
3,641,004	-		AO356_16090	0.43	+0.8
3,641,004	-		AO356_16090	0.43	+1.2
3,641,004	-		AO356_16090	0.43	-0.3
3,641,004	-		AO356_16090	0.43	-0.2
3,641,093	+		AO356_16090	0.53	-0.9
3,641,093	+		AO356_16090	0.53	-0.5
3,641,094	-		AO356_16090	0.53	+1.8
3,641,094	-		AO356_16090	0.53	-0.1
3,641,180	+		AO356_16090	0.63	-0.1
3,641,181	-		AO356_16090	0.63	-0.1
3,641,181	-		AO356_16090	0.63	-0.5
3,641,181	-		AO356_16090	0.63	+0.2
3,641,216	+		AO356_16090	0.67	+0.5
3,641,216	+		AO356_16090	0.67	+0.1
3,641,217	-		AO356_16090	0.67	+0.4
3,641,217	-		AO356_16090	0.67	-0.8
3,641,312	+		AO356_16090	0.78	+0.3
3,641,313	-		AO356_16090	0.78	-0.5
3,641,313	-		AO356_16090	0.78	-0.3