Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_09880

Experiment: 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine
2,234,556	+		AO356_09870	0.21	+1.7
2,234,556	+		AO356_09870	0.21	+1.6
2,234,556	+		AO356_09870	0.21	-0.3
2,234,557	-		AO356_09870	0.21	-0.6
2,234,595	+		AO356_09870	0.30	-0.5
2,234,595	+		AO356_09870	0.30	-0.7
2,234,595	+		AO356_09870	0.30	+1.0
2,234,595	+		AO356_09870	0.30	+0.6
2,234,596	-		AO356_09870	0.30	+0.0
2,234,596	-		AO356_09870	0.30	+0.4
2,234,596	-		AO356_09870	0.30	-0.3
2,234,596	-		AO356_09870	0.30	-0.6
2,234,669	+		AO356_09870	0.46	-0.2
2,234,669	+		AO356_09870	0.46	-0.8
2,234,669	+		AO356_09870	0.46	+0.8
2,234,669	+		AO356_09870	0.46	-0.1
2,234,669	+		AO356_09870	0.46	+0.4
2,234,669	+		AO356_09870	0.46	-0.1
2,234,669	+		AO356_09870	0.46	+0.1
2,234,669	+		AO356_09870	0.46	-1.0
2,234,669	+		AO356_09870	0.46	+1.3
2,234,669	+		AO356_09870	0.46	+0.4
2,234,670	-		AO356_09870	0.46	+0.9
2,234,670	-		AO356_09870	0.46	+0.6
2,234,670	-		AO356_09870	0.46	+0.6
2,234,670	-		AO356_09870	0.46	-0.1
2,234,778	+		AO356_09870	0.70	-0.1
2,234,907	+				+1.5
2,234,908	-				+0.7
2,234,920	+				-0.2
2,234,921	-				-0.5
2,235,022	+		AO356_09875	0.23	-0.3
2,235,022	+		AO356_09875	0.23	+0.0
2,235,022	+		AO356_09875	0.23	+0.4
2,235,022	+		AO356_09875	0.23	-1.2
2,235,022	+		AO356_09875	0.23	-0.1
2,235,022	+		AO356_09875	0.23	+0.0
2,235,022	+		AO356_09875	0.23	-1.0
2,235,022	+		AO356_09875	0.23	+0.3
2,235,022	+		AO356_09875	0.23	+0.2
2,235,022	+		AO356_09875	0.23	-0.5
2,235,023	-		AO356_09875	0.23	-0.1
2,235,023	-		AO356_09875	0.23	+0.6
2,235,023	-		AO356_09875	0.23	-0.1
2,235,023	-		AO356_09875	0.23	-0.6
2,235,023	-		AO356_09875	0.23	+0.4
2,235,023	-		AO356_09875	0.23	+0.2
2,235,023	-		AO356_09875	0.23	-0.0
2,235,023	-		AO356_09875	0.23	-0.1
2,235,046	+		AO356_09875	0.28	-1.7
2,235,046	+		AO356_09875	0.28	+0.2
2,235,046	+		AO356_09875	0.28	-0.4
2,235,046	+		AO356_09875	0.28	-0.2
2,235,046	+		AO356_09875	0.28	+1.2
2,235,047	-		AO356_09875	0.28	-0.2
2,235,047	-		AO356_09875	0.28	-0.7
2,235,047	-		AO356_09875	0.28	+1.0
2,235,127	+		AO356_09875	0.46	+0.5
2,235,127	+		AO356_09875	0.46	+0.0
2,235,127	+		AO356_09875	0.46	+0.9
2,235,127	+		AO356_09875	0.46	+0.3
2,235,128	-		AO356_09875	0.46	+0.0
2,235,128	-		AO356_09875	0.46	-0.8
2,235,128	-		AO356_09875	0.46	+0.0
2,235,128	-		AO356_09875	0.46	+0.2
2,235,128	-		AO356_09875	0.46	+0.2
2,235,128	-		AO356_09875	0.46	+0.0
2,235,128	-		AO356_09875	0.46	-0.5
2,235,169	+		AO356_09875	0.56	+0.0
2,235,169	+		AO356_09875	0.56	-0.2
2,235,169	+		AO356_09875	0.56	-1.0
2,235,170	-		AO356_09875	0.56	+0.2
2,235,170	-		AO356_09875	0.56	-0.6
2,235,226	+		AO356_09875	0.68	+0.4
2,235,226	+		AO356_09875	0.68	+0.8
2,235,226	+		AO356_09875	0.68	+1.0
2,235,226	+		AO356_09875	0.68	-0.6
2,235,226	+		AO356_09875	0.68	+0.3
2,235,226	+		AO356_09875	0.68	+0.4
2,235,226	+		AO356_09875	0.68	+0.6
2,235,226	+		AO356_09875	0.68	+0.6
2,235,227	-		AO356_09875	0.68	+0.0
2,235,227	-		AO356_09875	0.68	+0.2
2,235,227	-		AO356_09875	0.68	+0.3
2,235,227	-		AO356_09875	0.68	+0.0
2,235,227	-		AO356_09875	0.68	-0.3
2,235,227	-		AO356_09875	0.68	+0.0
2,235,227	-		AO356_09875	0.68	-0.1
2,235,227	-		AO356_09875	0.68	-0.1
2,235,227	-		AO356_09875	0.68	+0.0
2,235,227	-		AO356_09875	0.68	-0.4
2,235,227	-		AO356_09875	0.68	-0.3
2,235,227	-		AO356_09875	0.68	+0.7
2,235,230	+		AO356_09875	0.69	+0.0
2,235,230	+		AO356_09875	0.69	-0.1
2,235,230	+		AO356_09875	0.69	+0.0
2,235,230	+		AO356_09875	0.69	+0.4
2,235,230	+		AO356_09875	0.69	-0.9
2,235,230	+		AO356_09875	0.69	+0.5
2,235,230	+		AO356_09875	0.69	+0.0
2,235,230	+		AO356_09875	0.69	-0.7
2,235,230	+		AO356_09875	0.69	+0.4
2,235,230	+		AO356_09875	0.69	+0.2
2,235,230	+		AO356_09875	0.69	+0.6
2,235,230	+		AO356_09875	0.69	-0.2
2,235,230	+		AO356_09875	0.69	-0.8
2,235,231	-		AO356_09875	0.69	-0.1
2,235,231	-		AO356_09875	0.69	+0.7
2,235,231	-		AO356_09875	0.69	-0.2
2,235,231	-		AO356_09875	0.69	+2.4
2,235,231	-		AO356_09875	0.69	+0.0
2,235,231	-		AO356_09875	0.69	+0.4
2,235,231	-		AO356_09875	0.69	+0.3
2,235,231	-		AO356_09875	0.69	-0.7
2,235,231	-		AO356_09875	0.69	+0.9
2,235,277	-		AO356_09875	0.80	+2.2
2,235,352	+				-0.1
2,235,353	-				-0.3
2,235,359	+				+0.1
2,235,359	+				-0.6
2,235,359	+				+0.6
2,235,359	+				+0.7
2,235,359	+				+1.4
2,235,400	+				-0.2
2,235,400	+				-0.8
2,235,400	+				-0.3
2,235,400	+				+0.4
2,235,400	+				-1.3
2,235,400	+				-0.1
2,235,400	+				+0.6
2,235,400	+				-0.1
2,235,400	+				-1.0
2,235,400	+				+1.2
2,235,400	+				-1.6
2,235,400	+				+0.5
2,235,401	-				-0.7
2,235,401	-				-0.6
2,235,401	-				+0.4
2,235,401	-				-0.6
2,235,401	-				-0.1
2,235,401	-				+0.2
2,235,401	-				+0.2
2,235,401	-				+0.6
2,235,401	-				+0.7
2,235,401	-				+0.0
2,235,436	+				+0.4
2,235,437	-				+0.6
2,235,437	-				+0.2
2,235,437	-				+1.0
2,235,442	+				-0.1
2,235,442	+				-0.4
2,235,442	+				+0.4
2,235,442	+				-0.3
2,235,443	-				+1.2
2,235,443	-				-1.0
2,235,443	-				-0.2
2,235,443	-				-1.0
2,235,485	+				+0.0
2,235,487	+				-0.3
2,235,516	+				-1.0
2,235,516	+				+1.0
2,235,516	+				+0.2
2,235,516	+				+0.3
2,235,516	+				-0.8
2,235,517	-				+0.0
2,235,517	-				-2.0
2,235,517	-				-1.0
2,235,517	-				-2.0
2,235,517	-				-1.0
2,235,538	-				-0.6
2,235,631	-		AO356_09880	0.35	+0.7
2,235,631	-		AO356_09880	0.35	-0.6
2,235,640	-		AO356_09880	0.39	-0.2
2,235,640	-		AO356_09880	0.39	-1.6
2,235,734	-		AO356_09880	0.79	-0.3
2,235,779	+				+0.0
2,235,779	+				+0.4
2,235,779	+				-0.3
2,235,779	+				+0.3
2,235,779	+				+1.0
2,235,779	+				+0.4
2,235,779	+				-0.8
2,235,780	-				+0.8
2,235,780	-				+0.2
2,235,780	-				+0.4
2,235,780	-				+0.4
2,235,797	+				+1.0
2,235,797	+				-0.3
2,235,797	+				+0.0
2,235,797	+				+0.0
2,235,797	+				+0.0
2,235,797	+				+0.2
2,235,797	+				-0.4
2,235,797	+				+0.0
2,235,797	+				+0.5
2,235,797	+				-0.5
2,235,798	-				-1.2
2,235,798	-				+0.1
2,235,798	-				+0.0
2,235,798	-				+0.2
2,235,798	-				-0.2
2,235,798	-				+0.4
2,235,798	-				+0.3
2,235,798	-				+0.4
2,235,798	-				-1.0
2,235,798	-				-0.2
2,235,798	-				+0.4
2,235,801	+				-0.3
2,235,801	+				+0.9
2,235,802	-				-0.6
2,235,802	-				+0.4
2,235,802	-				+0.0
2,235,813	+				-0.3
2,235,813	+				+1.0
2,235,813	+				+0.5
2,235,814	-				+0.0
2,235,814	-				+0.0
2,235,815	+				-0.0
2,235,815	+				-0.4
2,235,816	-				+1.7
2,235,820	-				-1.6
2,235,820	-				-0.1
2,235,820	-				-0.1
2,235,820	-				-1.7
2,235,820	-				-0.2
2,235,822	+				+0.2
2,235,822	+				-0.6
2,235,822	+				+0.6
2,235,822	+				-0.3
2,235,882	+		AO356_09885	0.24	-0.7
2,235,909	+		AO356_09885	0.30	+0.0
2,235,909	+		AO356_09885	0.30	+1.0
2,235,909	+		AO356_09885	0.30	+0.9
2,235,959	+		AO356_09885	0.42	+1.1
2,235,959	+		AO356_09885	0.42	+1.2
2,235,959	+		AO356_09885	0.42	-0.4
2,235,959	+		AO356_09885	0.42	-0.1
2,235,959	+		AO356_09885	0.42	-0.4
2,235,959	+		AO356_09885	0.42	-0.1
2,235,960	-		AO356_09885	0.43	-0.1
2,235,960	-		AO356_09885	0.43	-0.4
2,235,960	-		AO356_09885	0.43	+1.0
2,235,960	-		AO356_09885	0.43	-0.4
2,235,960	-		AO356_09885	0.43	-0.3
2,235,960	-		AO356_09885	0.43	+0.2
2,236,000	+		AO356_09885	0.52	+1.4
2,236,001	-		AO356_09885	0.52	+0.9
2,236,070	-		AO356_09885	0.69	+0.8
2,236,116	-		AO356_09885	0.80	+0.8
2,236,116	-		AO356_09885	0.80	-0.5
2,236,123	-		AO356_09885	0.81	-0.2
2,236,123	-		AO356_09885	0.81	-0.9
2,236,123	-		AO356_09885	0.81	+0.3
2,236,196	+				+0.0
2,236,196	+				+1.3
2,236,196	+				+0.6
2,236,197	-				+0.2
2,236,198	+				-0.3
2,236,198	+				+0.3
2,236,199	-				+0.4
2,236,199	-				+1.0
2,236,199	-				+0.3
2,236,199	-				+0.3
2,236,199	-				-0.2
2,236,199	-				+0.1
2,236,199	-				+0.3
2,236,199	-				+0.5
2,236,251	-				-0.2
2,236,251	-				+0.4
2,236,336	+				-1.1
2,236,337	-				-0.7
2,236,430	+		AO356_09890	0.12	+0.5
2,236,430	+		AO356_09890	0.12	-0.6
2,236,430	+		AO356_09890	0.12	+1.3
2,236,430	+		AO356_09890	0.12	-0.2
2,236,430	+		AO356_09890	0.12	-0.6
2,236,431	-		AO356_09890	0.12	-1.9
2,236,431	-		AO356_09890	0.12	+1.3
2,236,431	-		AO356_09890	0.12	+1.4
2,236,431	-		AO356_09890	0.12	+0.5
2,236,431	-		AO356_09890	0.12	+0.3
2,236,443	+		AO356_09890	0.15	-1.6
2,236,443	+		AO356_09890	0.15	+0.0
2,236,444	-		AO356_09890	0.15	+0.9
2,236,444	-		AO356_09890	0.15	+0.0
2,236,444	-		AO356_09890	0.15	-0.5
2,236,444	-		AO356_09890	0.15	+1.6
2,236,481	-		AO356_09890	0.22	+0.2
2,236,492	+		AO356_09890	0.25	+0.0
2,236,492	+		AO356_09890	0.25	+1.8
2,236,492	+		AO356_09890	0.25	-0.8
2,236,492	+		AO356_09890	0.25	-0.4
2,236,492	+		AO356_09890	0.25	+1.3
2,236,492	+		AO356_09890	0.25	+0.6
2,236,492	+		AO356_09890	0.25	+0.1
2,236,492	+		AO356_09890	0.25	-1.3
2,236,493	-		AO356_09890	0.25	+0.2
2,236,493	-		AO356_09890	0.25	-0.0
2,236,493	-		AO356_09890	0.25	+1.0
2,236,493	-		AO356_09890	0.25	+0.6
2,236,550	+		AO356_09890	0.36	+0.3
2,236,551	-		AO356_09890	0.36	-0.1
2,236,555	+		AO356_09890	0.37	-1.0
2,236,555	+		AO356_09890	0.37	-0.2
2,236,555	+		AO356_09890	0.37	+0.4
2,236,555	+		AO356_09890	0.37	-0.1
2,236,555	+		AO356_09890	0.37	-0.2
2,236,555	+		AO356_09890	0.37	+0.0
2,236,555	+		AO356_09890	0.37	+1.4
2,236,556	-		AO356_09890	0.37	-0.1
2,236,556	-		AO356_09890	0.37	-0.6
2,236,556	-		AO356_09890	0.37	-0.8
2,236,556	-		AO356_09890	0.37	+1.0
2,236,556	-		AO356_09890	0.37	-0.6
2,236,590	+		AO356_09890	0.44	+0.5
2,236,590	+		AO356_09890	0.44	+0.0
2,236,591	-		AO356_09890	0.44	+0.1
2,236,596	+		AO356_09890	0.45	-1.5
2,236,596	+		AO356_09890	0.45	+0.0
2,236,596	+		AO356_09890	0.45	+0.2
2,236,597	-		AO356_09890	0.46	-1.0
2,236,597	-		AO356_09890	0.46	+0.9
2,236,597	-		AO356_09890	0.46	+0.5
2,236,597	-		AO356_09890	0.46	+0.2
2,236,597	-		AO356_09890	0.46	+0.5
2,236,597	-		AO356_09890	0.46	-0.1
2,236,597	-		AO356_09890	0.46	-0.8
2,236,619	+		AO356_09890	0.50	+0.4
2,236,619	+		AO356_09890	0.50	+0.4
2,236,620	-		AO356_09890	0.50	-1.0
2,236,711	-		AO356_09890	0.68	+0.1
2,236,723	+		AO356_09890	0.71	+0.0
2,236,725	+		AO356_09890	0.71	-1.0
2,236,725	+		AO356_09890	0.71	+0.2
2,236,725	+		AO356_09890	0.71	+0.0
2,236,725	+		AO356_09890	0.71	+1.2
2,236,725	+		AO356_09890	0.71	+0.9
2,236,726	-		AO356_09890	0.71	+3.6
2,236,726	-		AO356_09890	0.71	-0.3