Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_06915

Experiment: 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine
1,530,419	+		AO356_06910	0.59	+0.5
1,530,419	+		AO356_06910	0.59	-1.1
1,530,419	+		AO356_06910	0.59	-1.1
1,530,419	+		AO356_06910	0.59	+0.2
1,530,419	+		AO356_06910	0.59	-2.5
1,530,419	+		AO356_06910	0.59	-0.3
1,530,419	+		AO356_06910	0.59	-0.1
1,530,419	+		AO356_06910	0.59	+0.3
1,530,419	+		AO356_06910	0.59	-0.8
1,530,419	+		AO356_06910	0.59	-1.5
1,530,420	-		AO356_06910	0.59	-0.3
1,530,420	-		AO356_06910	0.59	-0.5
1,530,420	-		AO356_06910	0.59	-1.1
1,530,420	-		AO356_06910	0.59	-0.5
1,530,420	-		AO356_06910	0.59	-0.3
1,530,420	-		AO356_06910	0.59	-0.2
1,530,420	-		AO356_06910	0.59	-1.9
1,530,420	-		AO356_06910	0.59	+1.1
1,530,420	-		AO356_06910	0.59	-0.8
1,530,515	+		AO356_06910	0.64	-0.0
1,530,516	-		AO356_06910	0.64	-1.0
1,530,516	-		AO356_06910	0.64	-1.0
1,530,516	-		AO356_06910	0.64	-0.1
1,530,516	-		AO356_06910	0.64	-0.9
1,530,551	+		AO356_06910	0.67	+0.2
1,530,551	+		AO356_06910	0.67	+0.9
1,530,552	-		AO356_06910	0.67	+0.9
1,530,552	-		AO356_06910	0.67	+0.5
1,530,552	-		AO356_06910	0.67	+0.3
1,530,596	+		AO356_06910	0.69	+0.2
1,530,597	-		AO356_06910	0.69	+0.0
1,530,629	+		AO356_06910	0.71	-0.0
1,530,629	+		AO356_06910	0.71	-1.6
1,530,629	+		AO356_06910	0.71	-0.3
1,530,630	-		AO356_06910	0.71	-1.1
1,530,630	-		AO356_06910	0.71	-0.7
1,530,630	-		AO356_06910	0.71	-0.1
1,530,630	-		AO356_06910	0.71	-0.5
1,530,729	-		AO356_06910	0.77	-0.7
1,530,729	-		AO356_06910	0.77	-0.1
1,530,729	-		AO356_06910	0.77	+0.6
1,530,983	+				+0.1
1,530,984	-				+0.5
1,531,001	+				+0.1
1,531,002	-				-0.7
1,531,026	-				-0.1
1,531,068	-				-0.9
1,531,074	-				-0.7
1,531,096	-				-0.7
1,531,113	+				-0.5
1,531,114	-				-0.7
1,531,114	-				-0.0
1,531,114	-				-0.4
1,531,114	-				-2.9
1,531,114	-				-1.1
1,531,114	-				-0.8
1,531,114	-				+0.5
1,531,114	-				+0.1
1,531,114	-				-0.4
1,531,114	-				-1.1
1,531,114	-				-0.4
1,531,161	+				-0.9
1,531,161	+				+1.6
1,531,161	+				-1.1
1,531,161	+				+0.3
1,531,170	+				+1.9
1,531,170	+				-0.3
1,531,171	-				-0.3
1,531,172	+				-1.2
1,531,172	+				+0.4
1,531,173	-				+1.3
1,531,173	-				+0.9
1,531,173	-				-0.0
1,531,219	-				-0.4
1,531,226	+				+1.5
1,531,227	-				-1.3
1,531,227	-				+0.8
1,531,227	-				+0.9
1,531,227	-				-1.9
1,531,227	-				+1.3
1,531,300	+				+0.6
1,531,300	+				-0.1
1,531,300	+				-0.1
1,531,300	+				+0.1
1,531,300	+				+1.0
1,531,300	+				-0.3
1,531,300	+				-0.5
1,531,300	+				+1.3
1,531,300	+				+0.1
1,531,300	+				-1.0
1,531,300	+				-0.1
1,531,300	+				-0.1
1,531,300	+				+1.1
1,531,301	-				+0.8
1,531,301	-				+0.3
1,531,301	-				+0.5
1,531,301	-				-0.5
1,531,301	-				-0.2
1,531,301	-				+1.9
1,531,301	-				+0.8
1,531,301	-				-0.1
1,531,301	-				+1.0
1,531,301	-				-0.4
1,531,301	-				+0.0
1,531,316	+				-1.3
1,531,381	+				-0.4
1,531,381	+				-0.7
1,531,382	-				+0.2
1,531,458	+				+0.7
1,531,458	+				+0.2
1,531,458	+				+0.1
1,531,459	-				-0.1
1,531,459	-				+0.1
1,531,459	-				+0.7
1,531,473	+				-0.1
1,531,474	-				+0.1
1,531,593	+		AO356_06915	0.23	-0.5
1,531,608	+		AO356_06915	0.25	-0.4
1,531,608	+		AO356_06915	0.25	+0.3
1,531,608	+		AO356_06915	0.25	+0.5
1,531,608	+		AO356_06915	0.25	-0.1
1,531,608	+		AO356_06915	0.25	+0.5
1,531,674	+		AO356_06915	0.32	-0.0
1,531,674	+		AO356_06915	0.32	+1.2
1,531,674	+		AO356_06915	0.32	+0.2
1,531,674	+		AO356_06915	0.32	-1.7
1,531,674	+		AO356_06915	0.32	-1.1
1,531,675	-		AO356_06915	0.32	+0.8
1,531,675	-		AO356_06915	0.32	-0.2
1,531,675	-		AO356_06915	0.32	+0.8
1,531,675	-		AO356_06915	0.32	+0.1
1,531,675	-		AO356_06915	0.32	+1.1
1,531,675	-		AO356_06915	0.32	+0.7
1,531,675	-		AO356_06915	0.32	+0.9
1,531,675	-		AO356_06915	0.32	+0.6
1,531,675	-		AO356_06915	0.32	+1.6
1,531,737	+		AO356_06915	0.39	-0.4
1,531,738	-		AO356_06915	0.39	+0.7
1,531,785	+		AO356_06915	0.44	-0.8
1,531,785	+		AO356_06915	0.44	-1.8
1,531,785	+		AO356_06915	0.44	-0.1
1,531,786	-		AO356_06915	0.44	+1.5
1,531,786	-		AO356_06915	0.44	-0.2
1,531,786	-		AO356_06915	0.44	+0.0
1,531,786	-		AO356_06915	0.44	+0.7
1,531,786	-		AO356_06915	0.44	+0.5
1,531,786	-		AO356_06915	0.44	+0.6
1,531,786	-		AO356_06915	0.44	+0.4
1,531,844	+		AO356_06915	0.50	+0.4
1,531,844	+		AO356_06915	0.50	+0.7
1,531,844	+		AO356_06915	0.50	+0.0
1,531,844	+		AO356_06915	0.50	-0.6
1,531,844	+		AO356_06915	0.50	+0.7
1,531,845	-		AO356_06915	0.50	+0.4
1,531,845	-		AO356_06915	0.50	+0.4
1,531,845	-		AO356_06915	0.50	+0.3
1,531,900	-		AO356_06915	0.57	-0.4
1,531,932	+		AO356_06915	0.60	+0.5
1,531,945	+		AO356_06915	0.61	-0.7
1,531,945	+		AO356_06915	0.61	+0.9
1,531,946	-		AO356_06915	0.62	+0.4
1,531,946	-		AO356_06915	0.62	-0.3
1,531,992	+		AO356_06915	0.67	-0.3
1,532,061	+		AO356_06915	0.74	-0.1
1,532,061	+		AO356_06915	0.74	-0.4
1,532,061	+		AO356_06915	0.74	+0.4
1,532,136	-		AO356_06915	0.82	-0.1
1,532,163	+		AO356_06915	0.85	-0.1
1,532,163	+		AO356_06915	0.85	+0.4
1,532,163	+		AO356_06915	0.85	+0.5
1,532,163	+		AO356_06915	0.85	+0.1
1,532,164	-		AO356_06915	0.85	-0.1
1,532,164	-		AO356_06915	0.85	+0.9
1,532,164	-		AO356_06915	0.85	-0.2
1,532,164	-		AO356_06915	0.85	+0.0
1,532,400	-		AO356_06920	0.27	-0.1
1,532,420	+		AO356_06920	0.32	+0.2
1,532,420	+		AO356_06920	0.32	+0.9
1,532,420	+		AO356_06920	0.32	-0.3
1,532,420	+		AO356_06920	0.32	+1.3
1,532,420	+		AO356_06920	0.32	+0.0
1,532,420	+		AO356_06920	0.32	+0.5
1,532,420	+		AO356_06920	0.32	-0.2
1,532,420	+		AO356_06920	0.32	+0.0
1,532,421	-		AO356_06920	0.32	+0.8
1,532,421	-		AO356_06920	0.32	-1.1
1,532,421	-		AO356_06920	0.32	-0.1
1,532,421	-		AO356_06920	0.32	+0.7
1,532,421	-		AO356_06920	0.32	-0.3
1,532,421	-		AO356_06920	0.32	-0.3
1,532,421	-		AO356_06920	0.32	-1.1
1,532,421	-		AO356_06920	0.32	+0.0
1,532,421	-		AO356_06920	0.32	+0.1
1,532,477	+		AO356_06920	0.47	+0.5
1,532,477	+		AO356_06920	0.47	+0.6
1,532,478	-		AO356_06920	0.47	+0.1
1,532,478	-		AO356_06920	0.47	-0.4
1,532,478	-		AO356_06920	0.47	+0.9
1,532,478	-		AO356_06920	0.47	+0.1
1,532,479	+		AO356_06920	0.47	+0.5
1,532,479	+		AO356_06920	0.47	+0.9
1,532,479	+		AO356_06920	0.47	-0.5
1,532,480	-		AO356_06920	0.47	-1.1
1,533,243	+		AO356_06930	0.26	-0.2
1,533,243	+		AO356_06930	0.26	-0.1
1,533,244	-		AO356_06930	0.26	+0.4
1,533,244	-		AO356_06930	0.26	+0.6
1,533,277	+		AO356_06930	0.31	-0.3
1,533,277	+		AO356_06930	0.31	+1.1