Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0387
Experiment: BG11 with Bacitracin 0.0009765625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | BG11 with Bacitracin 0.0009765625 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 380,368 | + | +0.1 | |||
| 380,838 | + | +1.2 | |||
| 380,849 | + | Synpcc7942_0387 | 0.90 | -2.3 | |
| 380,857 | - | +0.9 | |||
| 380,859 | - | +0.2 | |||
| 380,868 | + | -0.6 | |||
| 380,868 | + | -1.5 | |||
| 380,868 | + | -1.6 | |||
| 380,868 | + | +0.2 | |||
| 380,868 | + | +0.1 | |||
| 380,868 | + | -2.3 | |||
| 380,868 | + | -0.0 | |||
| 380,868 | + | +1.1 | |||
| 380,868 | + | -1.4 | |||
| 380,871 | - | -3.1 | |||
| 380,876 | - | +0.4 | |||
| 380,876 | - | +1.1 | |||
| 380,876 | - | -0.2 | |||
| 380,876 | - | +0.2 | |||
| 380,876 | - | -0.5 | |||
| 380,876 | - | -0.3 | |||
| 380,876 | - | -0.2 | |||
| 380,876 | - | +0.6 | |||
| 381,058 | - | rfaG | Synpcc7942_0388 | 0.17 | -2.8 |
| 381,127 | + | rfaG | Synpcc7942_0388 | 0.23 | -2.1 |
| 381,127 | + | rfaG | Synpcc7942_0388 | 0.23 | -1.5 |
| 381,225 | + | rfaG | Synpcc7942_0388 | 0.32 | -1.9 |
| 381,398 | - | rfaG | Synpcc7942_0388 | 0.47 | +0.2 |
| 381,477 | - | rfaG | Synpcc7942_0388 | 0.54 | -0.8 |
| 381,478 | - | rfaG | Synpcc7942_0388 | 0.54 | -1.2 |
| 381,541 | - | rfaG | Synpcc7942_0388 | 0.60 | -2.9 |
| 381,806 | - | rfaG | Synpcc7942_0388 | 0.83 | -1.6 |
| 381,827 | + | rfaG | Synpcc7942_0388 | 0.85 | -1.2 |
Or see this region's nucleotide sequence