Experiment: Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS22945 and HSERO_RS22950 are separated by 62 nucleotides HSERO_RS22950 and HSERO_RS22955 are separated by 6 nucleotides HSERO_RS22955 and HSERO_RS22960 are separated by 122 nucleotides HSERO_RS22960 and HSERO_RS22965 are separated by 125 nucleotides
HSERO_RS22945: HSERO_RS22945 - thiophene oxidase, at 5,265,492 to 5,266,793
_RS22945
HSERO_RS22950: HSERO_RS22950 - isochorismatase, at 5,266,856 to 5,267,386
_RS22950
HSERO_RS22955: HSERO_RS22955 - D-amino acid dehydrogenase, at 5,267,393 to 5,268,679
_RS22955
HSERO_RS22960: HSERO_RS22960 - glyoxalase, at 5,268,802 to 5,269,188
_RS22960
HSERO_RS22965: HSERO_RS22965 - activator of HSP90 ATPase, at 5,269,314 to 5,269,769
_RS22965
Position (kb) 5267
5268
5269 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5266.661 kb on - strand, within HSERO_RS22945 at 5266.679 kb on - strand at 5266.719 kb on - strand at 5266.832 kb on + strand at 5266.916 kb on + strand, within HSERO_RS22950 at 5266.969 kb on - strand, within HSERO_RS22950 at 5266.974 kb on - strand, within HSERO_RS22950 at 5267.010 kb on - strand at 5267.010 kb on - strand, within HSERO_RS22950 at 5267.117 kb on - strand, within HSERO_RS22950 at 5267.202 kb on + strand, within HSERO_RS22950 at 5267.269 kb on + strand, within HSERO_RS22950 at 5267.486 kb on + strand at 5267.489 kb on - strand at 5267.521 kb on - strand at 5267.549 kb on - strand, within HSERO_RS22955 at 5267.553 kb on - strand, within HSERO_RS22955 at 5267.714 kb on - strand, within HSERO_RS22955 at 5267.736 kb on + strand, within HSERO_RS22955 at 5267.815 kb on + strand, within HSERO_RS22955 at 5267.911 kb on - strand, within HSERO_RS22955 at 5268.191 kb on - strand, within HSERO_RS22955 at 5268.246 kb on - strand, within HSERO_RS22955 at 5268.632 kb on + strand at 5268.759 kb on - strand at 5268.791 kb on - strand at 5269.057 kb on + strand, within HSERO_RS22960 at 5269.186 kb on - strand at 5269.319 kb on - strand at 5269.319 kb on - strand at 5269.319 kb on - strand at 5269.330 kb on - strand at 5269.355 kb on - strand at 5269.559 kb on + strand, within HSERO_RS22965
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB remove 5,266,661 - HSERO_RS22945 0.90 -0.2 5,266,679 - +1.5 5,266,719 - +0.3 5,266,832 + +0.2 5,266,916 + HSERO_RS22950 0.11 +0.3 5,266,969 - HSERO_RS22950 0.21 +0.0 5,266,974 - HSERO_RS22950 0.22 -0.8 5,267,010 - -0.1 5,267,010 - HSERO_RS22950 0.29 +0.3 5,267,117 - HSERO_RS22950 0.49 -0.3 5,267,202 + HSERO_RS22950 0.65 -1.1 5,267,269 + HSERO_RS22950 0.78 +0.6 5,267,486 + +0.3 5,267,489 - -0.6 5,267,521 - +0.3 5,267,549 - HSERO_RS22955 0.12 -0.6 5,267,553 - HSERO_RS22955 0.12 +0.1 5,267,714 - HSERO_RS22955 0.25 +0.8 5,267,736 + HSERO_RS22955 0.27 +0.3 5,267,815 + HSERO_RS22955 0.33 -0.0 5,267,911 - HSERO_RS22955 0.40 +1.7 5,268,191 - HSERO_RS22955 0.62 +1.1 5,268,246 - HSERO_RS22955 0.66 +2.4 5,268,632 + +0.1 5,268,759 - +0.8 5,268,791 - -1.9 5,269,057 + HSERO_RS22960 0.66 +0.1 5,269,186 - +0.6 5,269,319 - +1.9 5,269,319 - -0.1 5,269,319 - +0.3 5,269,330 - -0.3 5,269,355 - +0.0 5,269,559 + HSERO_RS22965 0.54 +0.0
Or see this region's nucleotide sequence