Experiment: Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS18685 and HSERO_RS18690 are separated by 404 nucleotides HSERO_RS18690 and HSERO_RS18695 are separated by 46 nucleotides HSERO_RS18695 and HSERO_RS18700 are separated by 82 nucleotides HSERO_RS18700 and HSERO_RS18705 overlap by 8 nucleotides
HSERO_RS18685: HSERO_RS18685 - hypothetical protein, at 4,289,812 to 4,290,423
_RS18685
HSERO_RS18690: HSERO_RS18690 - short-chain dehydrogenase, at 4,290,828 to 4,291,688
_RS18690
HSERO_RS18695: HSERO_RS18695 - hypothetical protein, at 4,291,735 to 4,292,130
_RS18695
HSERO_RS18700: HSERO_RS18700 - transcriptional regulator, at 4,292,213 to 4,292,572
_RS18700
HSERO_RS18705: HSERO_RS18705 - hypothetical protein, at 4,292,565 to 4,295,045
_RS18705
Position (kb) 4290
4291
4292 Strain fitness (log2 ratio) -2
-1
0
1 at 4290.203 kb on - strand, within HSERO_RS18685 at 4290.451 kb on + strand at 4290.469 kb on + strand at 4290.697 kb on - strand at 4290.886 kb on - strand at 4290.906 kb on + strand at 4291.110 kb on - strand, within HSERO_RS18690 at 4291.322 kb on - strand, within HSERO_RS18690 at 4291.457 kb on - strand, within HSERO_RS18690 at 4291.496 kb on + strand, within HSERO_RS18690 at 4291.642 kb on - strand at 4291.742 kb on + strand at 4291.843 kb on - strand, within HSERO_RS18695 at 4291.845 kb on + strand, within HSERO_RS18695 at 4291.855 kb on - strand, within HSERO_RS18695 at 4291.935 kb on - strand, within HSERO_RS18695 at 4292.039 kb on - strand, within HSERO_RS18695 at 4292.115 kb on + strand at 4292.118 kb on - strand at 4292.118 kb on - strand at 4292.187 kb on + strand at 4292.347 kb on - strand, within HSERO_RS18700 at 4292.674 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB remove 4,290,203 - HSERO_RS18685 0.64 +0.2 4,290,451 + +0.2 4,290,469 + -0.5 4,290,697 - -0.0 4,290,886 - +0.7 4,290,906 + -0.1 4,291,110 - HSERO_RS18690 0.33 +0.2 4,291,322 - HSERO_RS18690 0.57 +1.6 4,291,457 - HSERO_RS18690 0.73 +1.1 4,291,496 + HSERO_RS18690 0.78 +0.6 4,291,642 - +0.2 4,291,742 + +0.4 4,291,843 - HSERO_RS18695 0.27 +0.5 4,291,845 + HSERO_RS18695 0.28 +0.3 4,291,855 - HSERO_RS18695 0.30 +0.5 4,291,935 - HSERO_RS18695 0.51 +0.4 4,292,039 - HSERO_RS18695 0.77 +0.2 4,292,115 + +0.9 4,292,118 - -0.8 4,292,118 - -2.0 4,292,187 + -0.6 4,292,347 - HSERO_RS18700 0.37 -0.7 4,292,674 + -0.5
Or see this region's nucleotide sequence