Experiment: Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS18465 and HSERO_RS18470 overlap by 8 nucleotides HSERO_RS18470 and HSERO_RS18475 are separated by 3 nucleotides HSERO_RS18475 and HSERO_RS18480 are separated by 83 nucleotides HSERO_RS18480 and HSERO_RS18485 are separated by 4 nucleotides
HSERO_RS18465: HSERO_RS18465 - hypothetical protein, at 4,240,233 to 4,240,907
_RS18465
HSERO_RS18470: HSERO_RS18470 - acyltransferase, at 4,240,900 to 4,241,688
_RS18470
HSERO_RS18475: HSERO_RS18475 - acyl carrier protein, at 4,241,692 to 4,241,955
_RS18475
HSERO_RS18480: HSERO_RS18480 - acyl carrier protein, at 4,242,039 to 4,242,296
_RS18480
HSERO_RS18485: HSERO_RS18485 - membrane protein, at 4,242,301 to 4,242,867
_RS18485
Position (kb) 4240
4241
4242 Strain fitness (log2 ratio) -1
0
1
2 at 4239.998 kb on - strand at 4240.025 kb on + strand at 4240.102 kb on - strand at 4240.181 kb on + strand at 4240.189 kb on - strand at 4240.849 kb on + strand at 4240.857 kb on - strand at 4240.857 kb on - strand at 4240.954 kb on + strand at 4240.971 kb on + strand at 4241.187 kb on + strand, within HSERO_RS18470 at 4241.505 kb on + strand, within HSERO_RS18470 at 4241.662 kb on + strand at 4241.665 kb on - strand at 4241.753 kb on - strand, within HSERO_RS18475 at 4241.944 kb on + strand at 4242.009 kb on - strand at 4242.014 kb on + strand at 4242.070 kb on + strand, within HSERO_RS18480 at 4242.121 kb on + strand, within HSERO_RS18480 at 4242.130 kb on - strand, within HSERO_RS18480 at 4242.136 kb on - strand, within HSERO_RS18480 at 4242.136 kb on - strand, within HSERO_RS18480 at 4242.181 kb on + strand, within HSERO_RS18480 at 4242.248 kb on - strand at 4242.275 kb on - strand at 4242.357 kb on + strand at 4242.365 kb on - strand, within HSERO_RS18485 at 4242.377 kb on + strand, within HSERO_RS18485 at 4242.425 kb on - strand, within HSERO_RS18485 at 4242.519 kb on + strand, within HSERO_RS18485 at 4242.688 kb on + strand, within HSERO_RS18485
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB remove 4,239,998 - -0.6 4,240,025 + -0.1 4,240,102 - -0.4 4,240,181 + +0.2 4,240,189 - +0.0 4,240,849 + +0.2 4,240,857 - +0.3 4,240,857 - +0.5 4,240,954 + +0.2 4,240,971 + +0.7 4,241,187 + HSERO_RS18470 0.36 +0.3 4,241,505 + HSERO_RS18470 0.77 +1.2 4,241,662 + -0.4 4,241,665 - +0.0 4,241,753 - HSERO_RS18475 0.23 -0.5 4,241,944 + +1.9 4,242,009 - +0.0 4,242,014 + -0.1 4,242,070 + HSERO_RS18480 0.12 +0.1 4,242,121 + HSERO_RS18480 0.32 -0.1 4,242,130 - HSERO_RS18480 0.35 +0.0 4,242,136 - HSERO_RS18480 0.38 -0.1 4,242,136 - HSERO_RS18480 0.38 -0.1 4,242,181 + HSERO_RS18480 0.55 +1.4 4,242,248 - -0.2 4,242,275 - -0.6 4,242,357 + -0.3 4,242,365 - HSERO_RS18485 0.11 +0.9 4,242,377 + HSERO_RS18485 0.13 +1.1 4,242,425 - HSERO_RS18485 0.22 +0.2 4,242,519 + HSERO_RS18485 0.38 -0.1 4,242,688 + HSERO_RS18485 0.68 +0.9
Or see this region's nucleotide sequence