Experiment: Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS03785 and HSERO_RS03790 are separated by 30 nucleotides HSERO_RS03790 and HSERO_RS03795 are separated by 39 nucleotides HSERO_RS03795 and HSERO_RS03800 are separated by 90 nucleotides
HSERO_RS03785: HSERO_RS03785 - type VI secretion protein VasK, at 833,419 to 837,294
_RS03785
HSERO_RS03790: HSERO_RS03790 - hypothetical protein, at 837,325 to 838,851
_RS03790
HSERO_RS03795: HSERO_RS03795 - hypothetical protein, at 838,891 to 839,148
_RS03795
HSERO_RS03800: HSERO_RS03800 - hypothetical protein, at 839,239 to 840,078
_RS03800
Position (kb) 837
838
839 Strain fitness (log2 ratio) -1
0
1 at 836.403 kb on - strand, within HSERO_RS03785 at 836.431 kb on + strand, within HSERO_RS03785 at 836.695 kb on - strand, within HSERO_RS03785 at 836.918 kb on - strand at 836.923 kb on - strand at 837.181 kb on + strand at 837.192 kb on + strand at 837.200 kb on - strand at 837.200 kb on - strand at 837.217 kb on + strand at 837.456 kb on + strand at 837.888 kb on + strand, within HSERO_RS03790 at 837.973 kb on + strand, within HSERO_RS03790 at 838.354 kb on + strand, within HSERO_RS03790 at 838.462 kb on + strand, within HSERO_RS03790 at 838.682 kb on + strand, within HSERO_RS03790 at 838.695 kb on + strand, within HSERO_RS03790 at 838.755 kb on + strand at 839.519 kb on + strand, within HSERO_RS03800 at 839.519 kb on + strand, within HSERO_RS03800 at 839.578 kb on - strand, within HSERO_RS03800 at 839.647 kb on - strand, within HSERO_RS03800 at 839.713 kb on + strand, within HSERO_RS03800 at 839.757 kb on + strand, within HSERO_RS03800 at 839.824 kb on + strand, within HSERO_RS03800 at 839.824 kb on - strand, within HSERO_RS03800 at 839.847 kb on + strand, within HSERO_RS03800 at 839.847 kb on + strand, within HSERO_RS03800
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB remove 836,403 - HSERO_RS03785 0.77 -0.0 836,431 + HSERO_RS03785 0.78 -0.6 836,695 - HSERO_RS03785 0.85 +0.5 836,918 - -1.3 836,923 - +0.1 837,181 + +1.0 837,192 + +0.1 837,200 - +0.4 837,200 - -0.1 837,217 + +0.0 837,456 + -0.8 837,888 + HSERO_RS03790 0.37 -0.4 837,973 + HSERO_RS03790 0.42 +1.1 838,354 + HSERO_RS03790 0.67 +0.3 838,462 + HSERO_RS03790 0.74 -0.3 838,682 + HSERO_RS03790 0.89 +1.4 838,695 + HSERO_RS03790 0.90 +0.4 838,755 + +0.2 839,519 + HSERO_RS03800 0.33 -0.0 839,519 + HSERO_RS03800 0.33 +1.3 839,578 - HSERO_RS03800 0.40 +0.0 839,647 - HSERO_RS03800 0.49 -1.2 839,713 + HSERO_RS03800 0.56 -0.7 839,757 + HSERO_RS03800 0.62 -1.6 839,824 + HSERO_RS03800 0.70 -0.1 839,824 - HSERO_RS03800 0.70 +0.4 839,847 + HSERO_RS03800 0.72 -0.3 839,847 + HSERO_RS03800 0.72 -0.5
Or see this region's nucleotide sequence