Experiment: Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS00280 and HSERO_RS00285 are separated by 8 nucleotides HSERO_RS00285 and HSERO_RS00290 are separated by 35 nucleotides HSERO_RS00290 and HSERO_RS00295 are separated by 428 nucleotides
HSERO_RS00280: HSERO_RS00280 - ABC transporter permease, at 69,098 to 69,964
_RS00280
HSERO_RS00285: HSERO_RS00285 - sulfonate ABC transporter ATP-binding lipoprotein, at 69,973 to 70,845
_RS00285
HSERO_RS00290: HSERO_RS00290 - nitrate ABC transporter substrate-binding protein, at 70,881 to 71,909
_RS00290
HSERO_RS00295: HSERO_RS00295 - potassium transporter Kup, at 72,338 to 74,239
_RS00295
Position (kb) 70
71
72 Strain fitness (log2 ratio) -1
0
1 at 70.099 kb on + strand, within HSERO_RS00285 at 70.227 kb on - strand, within HSERO_RS00285 at 70.239 kb on + strand, within HSERO_RS00285 at 70.376 kb on - strand, within HSERO_RS00285 at 70.457 kb on + strand, within HSERO_RS00285 at 70.506 kb on - strand, within HSERO_RS00285 at 70.906 kb on - strand at 70.979 kb on + strand at 70.979 kb on + strand at 70.987 kb on - strand, within HSERO_RS00290 at 71.080 kb on - strand, within HSERO_RS00290 at 71.090 kb on - strand, within HSERO_RS00290 at 71.092 kb on + strand, within HSERO_RS00290 at 71.213 kb on - strand, within HSERO_RS00290 at 71.404 kb on + strand, within HSERO_RS00290 at 71.510 kb on - strand, within HSERO_RS00290 at 71.698 kb on + strand, within HSERO_RS00290 at 71.789 kb on + strand, within HSERO_RS00290 at 71.858 kb on - strand at 71.921 kb on + strand at 72.055 kb on - strand at 72.079 kb on - strand at 72.079 kb on - strand at 72.100 kb on + strand at 72.138 kb on + strand at 72.187 kb on - strand at 72.201 kb on + strand at 72.313 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB remove 70,099 + HSERO_RS00285 0.14 +0.4 70,227 - HSERO_RS00285 0.29 +0.5 70,239 + HSERO_RS00285 0.30 +0.7 70,376 - HSERO_RS00285 0.46 +0.1 70,457 + HSERO_RS00285 0.55 -0.1 70,506 - HSERO_RS00285 0.61 -0.6 70,906 - +0.3 70,979 + +0.4 70,979 + -0.1 70,987 - HSERO_RS00290 0.10 -0.0 71,080 - HSERO_RS00290 0.19 -0.1 71,090 - HSERO_RS00290 0.20 +1.3 71,092 + HSERO_RS00290 0.21 +1.4 71,213 - HSERO_RS00290 0.32 +1.0 71,404 + HSERO_RS00290 0.51 +0.3 71,510 - HSERO_RS00290 0.61 +0.1 71,698 + HSERO_RS00290 0.79 +0.3 71,789 + HSERO_RS00290 0.88 +0.4 71,858 - +0.4 71,921 + +0.0 72,055 - +0.4 72,079 - +0.4 72,079 - +0.4 72,100 + +0.4 72,138 + -0.1 72,187 - +0.1 72,201 + +0.4 72,313 + -0.3
Or see this region's nucleotide sequence