Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c35240

Experiment: m.b. Chloramphenicol 0.00002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.00002 mg/ml
3,693,976	+		PGA1_c35230	0.22	+0.4
3,693,976	+		PGA1_c35230	0.22	+1.5
3,694,029	+		PGA1_c35230	0.27	+0.3
3,694,047	-		PGA1_c35230	0.28	+0.1
3,694,135	-		PGA1_c35230	0.36	+1.2
3,694,158	+		PGA1_c35230	0.38	+0.9
3,694,208	-		PGA1_c35230	0.42	-2.4
3,694,288	+		PGA1_c35230	0.49	-0.9
3,694,290	-		PGA1_c35230	0.50	+1.3
3,694,317	-		PGA1_c35230	0.52	+0.3
3,694,317	-		PGA1_c35230	0.52	+0.3
3,694,370	+		PGA1_c35230	0.57	+0.3
3,694,375	+		PGA1_c35230	0.57	+0.0
3,694,386	+		PGA1_c35230	0.58	-1.1
3,694,394	-		PGA1_c35230	0.59	+1.3
3,694,422	+		PGA1_c35230	0.61	-1.1
3,694,427	+		PGA1_c35230	0.62	+1.3
3,694,430	-		PGA1_c35230	0.62	+1.6
3,694,459	+		PGA1_c35230	0.64	+0.3
3,694,459	+		PGA1_c35230	0.64	+1.2
3,694,459	+		PGA1_c35230	0.64	-0.0
3,694,466	+		PGA1_c35230	0.65	-0.1
3,694,509	-		PGA1_c35230	0.69	+0.5
3,694,509	-		PGA1_c35230	0.69	+1.0
3,694,523	-		PGA1_c35230	0.70	+0.0
3,694,535	-		PGA1_c35230	0.71	-0.6
3,694,559	-		PGA1_c35230	0.73	+1.3
3,694,599	+		PGA1_c35230	0.77	-0.7
3,694,599	+		PGA1_c35230	0.77	+0.9
3,694,607	-		PGA1_c35230	0.77	-0.0
3,694,630	-		PGA1_c35230	0.79	-0.1
3,694,723	+		PGA1_c35230	0.87	-1.1
3,694,731	-		PGA1_c35230	0.88	+0.6
3,694,749	+		PGA1_c35230	0.90	-0.7
3,694,783	+				+0.4
3,694,796	+				-1.0
3,694,797	-				-2.0
3,694,823	+				+0.6
3,694,902	+				-0.4
3,694,949	-				-0.2
3,694,981	+				-0.1
3,695,093	-		PGA1_c35240	0.11	+0.3
3,695,095	-		PGA1_c35240	0.11	-0.2
3,695,136	-		PGA1_c35240	0.14	+0.4
3,695,187	+		PGA1_c35240	0.18	+2.6
3,695,198	+		PGA1_c35240	0.19	-1.8
3,695,198	+		PGA1_c35240	0.19	+1.2
3,695,198	+		PGA1_c35240	0.19	-0.3
3,695,198	+		PGA1_c35240	0.19	+0.6
3,695,198	+		PGA1_c35240	0.19	+1.7
3,695,206	-		PGA1_c35240	0.19	-1.0
3,695,206	-		PGA1_c35240	0.19	+0.1
3,695,218	+		PGA1_c35240	0.20	+0.2
3,695,218	+		PGA1_c35240	0.20	+0.2
3,695,220	+		PGA1_c35240	0.20	+0.5
3,695,228	-		PGA1_c35240	0.21	+1.3
3,695,270	+		PGA1_c35240	0.24	-0.8
3,695,313	+		PGA1_c35240	0.27	+1.3
3,695,313	+		PGA1_c35240	0.27	-0.5
3,695,389	+		PGA1_c35240	0.33	-1.1
3,695,397	-		PGA1_c35240	0.34	+0.3
3,695,397	-		PGA1_c35240	0.34	-1.9
3,695,497	+		PGA1_c35240	0.41	+1.0
3,695,505	-		PGA1_c35240	0.42	-1.0
3,695,505	-		PGA1_c35240	0.42	+2.1
3,695,505	-		PGA1_c35240	0.42	+1.6
3,695,560	+		PGA1_c35240	0.46	-0.1
3,695,586	-		PGA1_c35240	0.48	+0.2
3,695,615	+		PGA1_c35240	0.50	+1.1
3,695,617	+		PGA1_c35240	0.51	+1.3
3,695,617	+		PGA1_c35240	0.51	-0.5
3,695,617	+		PGA1_c35240	0.51	+0.7
3,695,625	-		PGA1_c35240	0.51	+0.1
3,695,691	-		PGA1_c35240	0.56	-0.9
3,695,743	+		PGA1_c35240	0.60	-0.1
3,695,750	+		PGA1_c35240	0.61	-0.4
3,695,750	+		PGA1_c35240	0.61	-1.0
3,695,750	+		PGA1_c35240	0.61	+1.7
3,695,758	-		PGA1_c35240	0.61	+0.9
3,695,758	-		PGA1_c35240	0.61	+1.6
3,695,811	-		PGA1_c35240	0.65	+1.1
3,695,896	+		PGA1_c35240	0.72	+2.4
3,695,904	-		PGA1_c35240	0.73	-1.3
3,695,916	+		PGA1_c35240	0.73	+0.8
3,695,922	+		PGA1_c35240	0.74	+0.7
3,695,947	+		PGA1_c35240	0.76	-1.1
3,695,975	-		PGA1_c35240	0.78	+0.9
3,696,027	+		PGA1_c35240	0.82	-1.0
3,696,139	+				-0.0
3,696,248	+				+0.9
3,696,263	+				+0.5
3,696,320	-				-0.2
3,696,345	-				-1.2
3,696,571	-		PGA1_c35250	0.28	-0.3
3,696,585	-		PGA1_c35250	0.29	-0.3
3,696,585	-		PGA1_c35250	0.29	+0.3
3,696,598	+		PGA1_c35250	0.30	+0.9
3,696,618	+		PGA1_c35250	0.32	-0.3
3,696,619	-		PGA1_c35250	0.32	+1.8
3,696,630	+		PGA1_c35250	0.33	-0.2
3,696,635	+		PGA1_c35250	0.34	+0.1
3,696,698	+		PGA1_c35250	0.39	+1.2
3,696,704	+		PGA1_c35250	0.40	-0.5
3,696,704	+		PGA1_c35250	0.40	+0.4
3,696,704	+		PGA1_c35250	0.40	+1.3
3,696,776	+		PGA1_c35250	0.47	-0.7
3,696,817	-		PGA1_c35250	0.51	+0.8
3,696,817	-		PGA1_c35250	0.51	+0.2
3,696,900	-		PGA1_c35250	0.58	+1.1
3,696,902	+		PGA1_c35250	0.58	-1.0
3,696,910	-		PGA1_c35250	0.59	+0.8
3,696,935	-		PGA1_c35250	0.62	-1.7
3,697,017	-		PGA1_c35250	0.69	-1.4
3,697,060	+		PGA1_c35250	0.73	-0.9
3,697,068	-		PGA1_c35250	0.74	+0.3
3,697,068	-		PGA1_c35250	0.74	-1.2
3,697,068	-		PGA1_c35250	0.74	+0.5
3,697,068	-		PGA1_c35250	0.74	+1.1
3,697,068	-		PGA1_c35250	0.74	-1.1
3,697,078	-		PGA1_c35250	0.75	+0.1
3,697,101	+		PGA1_c35250	0.77	+1.8
3,697,115	-		PGA1_c35250	0.78	-1.9
3,697,115	-		PGA1_c35250	0.78	+0.2
3,697,184	+		PGA1_c35250	0.85	-0.2
3,697,191	+		PGA1_c35250	0.85	-1.9
3,697,192	+		PGA1_c35250	0.86	+0.1
3,697,192	+		PGA1_c35250	0.86	+0.7
3,697,192	+		PGA1_c35250	0.86	-0.6
3,697,192	+		PGA1_c35250	0.86	+1.6
3,697,200	-		PGA1_c35250	0.86	+0.8
3,697,200	-		PGA1_c35250	0.86	+1.1
3,697,200	-		PGA1_c35250	0.86	+1.2
3,697,200	-		PGA1_c35250	0.86	-1.1