Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c32200

Experiment: m.b. Chloramphenicol 0.00002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.00002 mg/ml
3,375,684	-				-2.5
3,375,791	+				-0.9
3,375,820	+				-0.4
3,375,824	-				-1.7
3,375,870	-				-0.6
3,375,877	+				+0.9
3,375,885	-				+0.1
3,375,934	-				-1.5
3,376,024	-		PGA1_c32190	0.20	+0.5
3,376,072	-		PGA1_c32190	0.26	+0.2
3,376,101	+		PGA1_c32190	0.30	+0.8
3,376,101	+		PGA1_c32190	0.30	+0.1
3,376,101	+		PGA1_c32190	0.30	-0.9
3,376,104	-		PGA1_c32190	0.30	+0.9
3,376,109	-		PGA1_c32190	0.31	-0.9
3,376,109	-		PGA1_c32190	0.31	+0.9
3,376,109	-		PGA1_c32190	0.31	+0.7
3,376,111	+		PGA1_c32190	0.31	+0.9
3,376,111	+		PGA1_c32190	0.31	+0.5
3,376,125	-		PGA1_c32190	0.33	+0.2
3,376,184	+		PGA1_c32190	0.40	+0.4
3,376,200	-		PGA1_c32190	0.42	-2.0
3,376,217	+		PGA1_c32190	0.45	+0.2
3,376,224	+		PGA1_c32190	0.45	-2.0
3,376,225	-		PGA1_c32190	0.46	+0.6
3,376,228	+		PGA1_c32190	0.46	+0.5
3,376,233	-		PGA1_c32190	0.47	+0.8
3,376,294	+		PGA1_c32190	0.54	+0.2
3,376,303	-		PGA1_c32190	0.55	+0.9
3,376,400	+		PGA1_c32190	0.67	+0.1
3,376,427	+		PGA1_c32190	0.71	-0.1
3,376,470	-		PGA1_c32190	0.76	+0.8
3,376,470	-		PGA1_c32190	0.76	-0.1
3,376,470	-		PGA1_c32190	0.76	+0.5
3,376,512	+		PGA1_c32190	0.81	+0.4
3,376,512	+		PGA1_c32190	0.81	+0.4
3,376,520	-		PGA1_c32190	0.82	-0.1
3,376,520	-		PGA1_c32190	0.82	+0.5
3,376,520	-		PGA1_c32190	0.82	+1.0
3,376,533	+		PGA1_c32190	0.84	+0.5
3,376,538	-		PGA1_c32190	0.85	-1.2
3,376,541	-		PGA1_c32190	0.85	+0.4
3,376,541	-		PGA1_c32190	0.85	-0.7
3,376,554	+		PGA1_c32190	0.87	+0.7
3,376,562	-		PGA1_c32190	0.88	+0.4
3,376,610	+				+0.8
3,376,646	+				+1.3
3,376,646	+				+0.1
3,376,646	+				-1.2
3,376,647	-				+0.9
3,376,647	-				-1.3
3,376,647	-				-1.5
3,376,654	-				-0.7
3,376,654	-				-0.1
3,376,654	-				-1.0
3,376,720	-				-0.7
3,376,730	+				-0.7
3,376,758	-		PGA1_c32200	0.12	+1.3
3,376,768	+		PGA1_c32200	0.13	+0.9
3,376,803	+		PGA1_c32200	0.17	-0.5
3,376,803	+		PGA1_c32200	0.17	+1.3
3,376,803	+		PGA1_c32200	0.17	-0.2
3,376,803	+		PGA1_c32200	0.17	+0.5
3,376,803	+		PGA1_c32200	0.17	-0.4
3,376,803	+		PGA1_c32200	0.17	-0.2
3,376,811	-		PGA1_c32200	0.18	-1.1
3,376,819	+		PGA1_c32200	0.19	-0.2
3,376,907	-		PGA1_c32200	0.29	-2.5
3,376,912	-		PGA1_c32200	0.30	+0.3
3,377,034	-		PGA1_c32200	0.44	-0.6
3,377,053	+		PGA1_c32200	0.46	+0.1
3,377,070	+		PGA1_c32200	0.48	+0.3
3,377,078	-		PGA1_c32200	0.49	+1.2
3,377,098	+		PGA1_c32200	0.52	-0.3
3,377,160	-		PGA1_c32200	0.59	+0.9
3,377,258	+		PGA1_c32200	0.70	-0.9
3,377,311	-		PGA1_c32200	0.76	+0.3
3,377,334	-		PGA1_c32200	0.79	-2.2
3,377,334	-		PGA1_c32200	0.79	+1.7
3,377,334	-		PGA1_c32200	0.79	+0.6
3,377,361	-		PGA1_c32200	0.82	+0.8
3,377,361	-		PGA1_c32200	0.82	+1.8
3,377,380	-		PGA1_c32200	0.85	+0.8
3,377,384	-		PGA1_c32200	0.85	+1.3
3,377,400	+		PGA1_c32200	0.87	+1.9
3,377,466	-				-1.1
3,377,538	-				-0.6
3,377,589	+				+0.1
3,377,617	+		PGA1_c32210	0.11	-0.3
3,377,621	+		PGA1_c32210	0.11	+0.1
3,377,654	+		PGA1_c32210	0.15	+0.6
3,377,654	+		PGA1_c32210	0.15	+0.8
3,377,654	+		PGA1_c32210	0.15	-0.9
3,377,662	-		PGA1_c32210	0.16	+0.7
3,377,662	-		PGA1_c32210	0.16	-0.2
3,377,662	-		PGA1_c32210	0.16	-0.5
3,377,662	-		PGA1_c32210	0.16	-1.2
3,377,676	+		PGA1_c32210	0.17	-0.7
3,377,833	+		PGA1_c32210	0.33	+2.6
3,377,842	-		PGA1_c32210	0.34	-0.1
3,377,859	+		PGA1_c32210	0.36	+1.0
3,377,879	+		PGA1_c32210	0.38	+0.0
3,377,883	+		PGA1_c32210	0.38	+0.7
3,377,954	-		PGA1_c32210	0.45	+0.8
3,378,052	+		PGA1_c32210	0.55	-0.3
3,378,092	+		PGA1_c32210	0.59	+0.4
3,378,092	+		PGA1_c32210	0.59	+0.8
3,378,092	+		PGA1_c32210	0.59	-1.1
3,378,100	-		PGA1_c32210	0.60	-0.8
3,378,100	-		PGA1_c32210	0.60	-0.3
3,378,148	-		PGA1_c32210	0.65	-0.0
3,378,170	-		PGA1_c32210	0.67	+0.5
3,378,170	-		PGA1_c32210	0.67	-2.5
3,378,170	-		PGA1_c32210	0.67	-0.1
3,378,174	+		PGA1_c32210	0.68	+0.7
3,378,182	-		PGA1_c32210	0.68	+0.5
3,378,228	+		PGA1_c32210	0.73	+1.3
3,378,228	+		PGA1_c32210	0.73	+0.3
3,378,228	+		PGA1_c32210	0.73	+0.3
3,378,236	-		PGA1_c32210	0.74	+0.8
3,378,236	-		PGA1_c32210	0.74	-0.5
3,378,258	-		PGA1_c32210	0.76	-0.0
3,378,260	-		PGA1_c32210	0.76	+0.1
3,378,264	+		PGA1_c32210	0.77	+0.0
3,378,272	-		PGA1_c32210	0.78	-0.9
3,378,274	-		PGA1_c32210	0.78	-0.1
3,378,274	-		PGA1_c32210	0.78	+0.6
3,378,274	-		PGA1_c32210	0.78	-0.2
3,378,274	-		PGA1_c32210	0.78	-0.7
3,378,307	-		PGA1_c32210	0.81	+0.8
3,378,317	-		PGA1_c32210	0.82	-2.0
3,378,323	+		PGA1_c32210	0.83	+1.1
3,378,369	-		PGA1_c32210	0.88	-0.0
3,378,416	+				+0.6
3,378,458	+				-1.5
3,378,496	-				+1.4
3,378,498	+				+0.6
3,378,506	-				+1.6