Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c29180

Experiment: m.b. Chloramphenicol 0.00002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.00002 mg/ml
3,054,362	-				+2.8
3,054,373	-				-0.5
3,054,389	-				-0.2
3,054,392	+				+0.0
3,054,400	-				+0.0
3,054,427	-				-0.7
3,054,597	-		PGA1_c29170	0.23	-0.1
3,054,656	-		PGA1_c29170	0.29	-2.3
3,054,668	+		PGA1_c29170	0.30	-0.6
3,054,699	+		PGA1_c29170	0.33	+0.4
3,054,737	-		PGA1_c29170	0.37	-1.0
3,054,743	-		PGA1_c29170	0.38	-0.2
3,054,771	+		PGA1_c29170	0.41	-0.5
3,054,779	-		PGA1_c29170	0.41	-1.4
3,054,779	-		PGA1_c29170	0.41	-1.0
3,054,790	-		PGA1_c29170	0.43	-0.5
3,054,790	-		PGA1_c29170	0.43	-1.0
3,054,829	+		PGA1_c29170	0.47	-0.9
3,054,847	-		PGA1_c29170	0.48	+0.4
3,054,858	-		PGA1_c29170	0.50	-0.8
3,054,863	+		PGA1_c29170	0.50	-2.1
3,054,948	+		PGA1_c29170	0.59	-1.3
3,054,956	+		PGA1_c29170	0.60	+0.5
3,054,961	-		PGA1_c29170	0.60	-1.0
3,054,965	+		PGA1_c29170	0.60	-0.2
3,055,043	+		PGA1_c29170	0.68	+0.5
3,055,089	+		PGA1_c29170	0.73	+0.1
3,055,089	+		PGA1_c29170	0.73	-0.6
3,055,095	-		PGA1_c29170	0.74	-0.3
3,055,097	-		PGA1_c29170	0.74	-0.9
3,055,337	-				-0.0
3,055,470	-		PGA1_c29180	0.21	+0.4
3,055,470	-		PGA1_c29180	0.21	-0.0
3,055,587	+		PGA1_c29180	0.41	+1.3
3,055,775	-		PGA1_c29180	0.74	+0.8
3,055,815	+		PGA1_c29180	0.81	-0.2
3,055,871	-				-0.0
3,055,886	-				+0.6
3,055,927	-				-0.3
3,055,968	+				-0.5
3,056,030	-		PGA1_c29190	0.14	-0.3
3,056,071	-		PGA1_c29190	0.19	-1.5
3,056,071	-		PGA1_c29190	0.19	-0.7
3,056,093	+		PGA1_c29190	0.22	-0.1
3,056,102	-		PGA1_c29190	0.23	-2.3
3,056,102	-		PGA1_c29190	0.23	+0.6
3,056,108	+		PGA1_c29190	0.24	-0.1
3,056,214	+		PGA1_c29190	0.38	+0.6
3,056,282	-		PGA1_c29190	0.48	+0.1
3,056,313	-		PGA1_c29190	0.52	-1.4
3,056,341	-		PGA1_c29190	0.56	+0.8
3,056,374	-		PGA1_c29190	0.60	-1.2
3,056,375	-		PGA1_c29190	0.60	-0.5
3,056,402	-		PGA1_c29190	0.64	-1.2
3,056,402	-		PGA1_c29190	0.64	-0.9
3,056,407	-		PGA1_c29190	0.64	-1.6
3,056,427	-		PGA1_c29190	0.67	-0.6
3,056,429	+		PGA1_c29190	0.67	-1.6
3,056,429	+		PGA1_c29190	0.67	+0.5
3,056,493	-		PGA1_c29190	0.76	+1.2
3,056,526	-		PGA1_c29190	0.80	-1.3
3,056,618	-				-0.7
3,056,618	-				+0.4
3,056,673	+				-2.2
3,056,775	+		PGA1_c29200	0.15	+1.1
3,056,775	+		PGA1_c29200	0.15	+1.0
3,056,775	+		PGA1_c29200	0.15	+1.0
3,056,783	-		PGA1_c29200	0.16	+0.3
3,056,793	+		PGA1_c29200	0.17	+0.1
3,056,856	+		PGA1_c29200	0.26	+0.3