Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27800

Experiment: m.b. Chloramphenicol 0.00002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.00002 mg/ml
2,894,554	-				+1.6
2,894,620	+		PGA1_c27790	0.13	-0.0
2,894,629	-		PGA1_c27790	0.13	-1.5
2,894,664	+		PGA1_c27790	0.17	+2.1
2,894,717	+		PGA1_c27790	0.22	+0.6
2,894,749	-		PGA1_c27790	0.25	+1.2
2,894,753	+		PGA1_c27790	0.25	+0.6
2,894,770	+		PGA1_c27790	0.27	-0.8
2,894,777	-		PGA1_c27790	0.27	-1.5
2,894,796	-		PGA1_c27790	0.29	+1.3
2,894,843	+		PGA1_c27790	0.34	-0.7
2,894,843	+		PGA1_c27790	0.34	-0.1
2,894,843	+		PGA1_c27790	0.34	-1.4
2,894,911	+		PGA1_c27790	0.40	+1.4
2,894,944	+		PGA1_c27790	0.43	+0.1
2,894,952	-		PGA1_c27790	0.44	-0.5
2,894,963	+		PGA1_c27790	0.45	+1.2
2,894,963	+		PGA1_c27790	0.45	-0.8
2,894,969	-		PGA1_c27790	0.46	+0.5
2,894,973	+		PGA1_c27790	0.46	-2.7
2,894,973	+		PGA1_c27790	0.46	+0.4
2,894,981	-		PGA1_c27790	0.47	-0.8
2,895,009	-		PGA1_c27790	0.49	-1.2
2,895,076	+		PGA1_c27790	0.56	+0.4
2,895,081	+		PGA1_c27790	0.56	+0.8
2,895,089	+		PGA1_c27790	0.57	-2.7
2,895,089	-		PGA1_c27790	0.57	+0.8
2,895,127	+		PGA1_c27790	0.61	-0.1
2,895,127	-		PGA1_c27790	0.61	+0.8
2,895,131	+		PGA1_c27790	0.61	-0.2
2,895,213	+		PGA1_c27790	0.69	+0.3
2,895,213	+		PGA1_c27790	0.69	+0.4
2,895,213	+		PGA1_c27790	0.69	-0.5
2,895,221	-		PGA1_c27790	0.70	-0.8
2,895,221	-		PGA1_c27790	0.70	+0.9
2,895,232	-		PGA1_c27790	0.71	-0.4
2,895,334	+		PGA1_c27790	0.80	+1.5
2,895,381	+		PGA1_c27790	0.85	+0.2
2,895,489	-				+0.8
2,895,551	+				+0.1
2,895,557	+				+0.8
2,895,565	-				+0.1
2,895,603	-				+0.1
2,895,605	+				-0.9
2,895,607	+				-1.2
2,895,608	-				+2.6
2,895,608	-				-0.8
2,895,615	-				-0.6
2,895,636	+				-0.5
2,895,636	-				-0.6
2,895,644	-				+1.7
2,895,673	-				+0.3
2,895,723	-		PGA1_c27800	0.11	+0.6
2,895,776	+		PGA1_c27800	0.14	+0.2
2,895,857	+		PGA1_c27800	0.19	+0.8
2,895,943	+		PGA1_c27800	0.24	+0.5
2,895,993	+		PGA1_c27800	0.27	+0.1
2,896,002	+		PGA1_c27800	0.27	+0.2
2,896,034	+		PGA1_c27800	0.29	+0.3
2,896,112	-		PGA1_c27800	0.34	+1.8
2,896,243	-		PGA1_c27800	0.42	+0.5
2,896,243	-		PGA1_c27800	0.42	+0.1
2,896,243	-		PGA1_c27800	0.42	-0.8
2,896,375	-		PGA1_c27800	0.49	+1.6
2,896,399	-		PGA1_c27800	0.51	-0.8
2,896,399	-		PGA1_c27800	0.51	-1.3
2,896,421	+		PGA1_c27800	0.52	-0.3
2,896,421	+		PGA1_c27800	0.52	+2.8
2,896,429	-		PGA1_c27800	0.53	+1.6
2,896,534	+		PGA1_c27800	0.59	-0.1
2,896,622	-		PGA1_c27800	0.64	+0.4
2,896,622	-		PGA1_c27800	0.64	+1.4
2,896,703	-		PGA1_c27800	0.69	-0.8
2,896,724	-		PGA1_c27800	0.70	+1.0
2,896,750	+		PGA1_c27800	0.72	-0.0
2,896,776	+		PGA1_c27800	0.73	-0.1
2,896,803	-		PGA1_c27800	0.75	+0.1
2,896,803	-		PGA1_c27800	0.75	-1.3
2,896,822	-		PGA1_c27800	0.76	+0.8
2,896,844	-		PGA1_c27800	0.77	+0.0
2,896,988	-		PGA1_c27800	0.86	+0.7
2,897,050	-		PGA1_c27800	0.90	-0.3
2,897,136	+				+1.5
2,897,136	+				+0.5
2,897,141	+				-0.2
2,897,146	+				-0.3
2,897,151	+				-0.2
2,897,183	-				+3.2
2,897,275	-				-1.5
2,897,298	-				+1.1
2,897,352	-		PGA1_c27810	0.15	-0.9
2,897,460	+		PGA1_c27810	0.28	+0.1
2,897,460	+		PGA1_c27810	0.28	-1.4
2,897,465	+		PGA1_c27810	0.29	+2.2
2,897,473	-		PGA1_c27810	0.30	-0.5
2,897,644	+		PGA1_c27810	0.50	-0.0
2,897,644	+		PGA1_c27810	0.50	+0.5
2,897,644	+		PGA1_c27810	0.50	+0.7
2,897,652	-		PGA1_c27810	0.51	+0.7
2,897,652	-		PGA1_c27810	0.51	-0.2
2,897,652	-		PGA1_c27810	0.51	+0.6
2,897,654	+		PGA1_c27810	0.51	+1.4
2,897,684	-		PGA1_c27810	0.54	+1.3
2,897,704	+		PGA1_c27810	0.57	+0.2
2,897,722	-		PGA1_c27810	0.59	+0.1
2,897,789	+		PGA1_c27810	0.67	+1.1
2,897,853	+		PGA1_c27810	0.74	-0.7
2,897,853	+		PGA1_c27810	0.74	+0.1
2,897,902	+		PGA1_c27810	0.80	-1.1
2,897,990	+				-0.7
2,897,998	-				+0.1
2,898,032	+				-0.4
2,898,173	-				-2.1
2,898,206	-				-1.7
2,898,218	+				-0.5
2,898,218	+				-1.3
2,898,218	+				+1.0