Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27450

Experiment: m.b. Chloramphenicol 0.00002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.00002 mg/ml
2,859,044	+		PGA1_c27430	0.73	+0.0
2,859,052	-		PGA1_c27430	0.74	-0.9
2,859,094	+		PGA1_c27430	0.78	-1.2
2,859,099	+		PGA1_c27430	0.78	-0.0
2,859,123	-		PGA1_c27430	0.80	-0.4
2,859,132	+		PGA1_c27430	0.81	+0.7
2,859,162	+		PGA1_c27430	0.84	-1.2
2,859,169	-		PGA1_c27430	0.84	-1.3
2,859,170	-		PGA1_c27430	0.84	-0.8
2,859,213	+		PGA1_c27430	0.88	+0.3
2,859,317	-				+0.3
2,859,317	-				+0.8
2,859,384	+				-0.6
2,859,450	-		PGA1_c27440	0.12	+0.1
2,859,453	+		PGA1_c27440	0.12	+0.5
2,859,477	-		PGA1_c27440	0.16	+0.3
2,859,479	+		PGA1_c27440	0.16	+1.0
2,859,524	+		PGA1_c27440	0.23	-0.1
2,859,583	+		PGA1_c27440	0.32	+0.8
2,859,591	-		PGA1_c27440	0.33	-0.9
2,859,596	-		PGA1_c27440	0.34	+2.2
2,859,596	-		PGA1_c27440	0.34	-0.2
2,859,596	-		PGA1_c27440	0.34	-1.2
2,859,596	-		PGA1_c27440	0.34	+1.1
2,859,607	-		PGA1_c27440	0.35	-0.6
2,859,698	+		PGA1_c27440	0.49	-1.4
2,859,800	+		PGA1_c27440	0.64	+0.2
2,859,808	-		PGA1_c27440	0.65	-0.1
2,859,808	-		PGA1_c27440	0.65	-1.0
2,859,820	+		PGA1_c27440	0.67	+0.5
2,859,864	-		PGA1_c27440	0.74	-0.4
2,859,872	-		PGA1_c27440	0.75	-0.2
2,859,933	-		PGA1_c27440	0.84	+0.0
2,859,974	+				+0.9
2,859,988	+				+0.7
2,859,988	+				+0.3
2,859,988	+				-2.3
2,859,996	-				+0.8
2,859,996	-				-1.6
2,860,038	-				-1.2
2,860,038	-				+0.7
2,860,046	+				+0.4
2,860,046	+				+0.9
2,860,054	-				-1.3
2,860,054	-				-0.1
2,860,082	-				+0.2
2,860,127	+		PGA1_c27450	0.13	-0.1
2,860,127	-		PGA1_c27450	0.13	+1.1
2,860,153	-		PGA1_c27450	0.17	-1.7
2,860,185	-		PGA1_c27450	0.22	+0.2
2,860,230	+		PGA1_c27450	0.28	+1.1
2,860,246	+		PGA1_c27450	0.30	+0.1
2,860,267	-		PGA1_c27450	0.33	+1.0
2,860,267	-		PGA1_c27450	0.33	+1.1
2,860,399	+		PGA1_c27450	0.52	+0.8
2,860,402	-		PGA1_c27450	0.53	+0.4
2,860,402	-		PGA1_c27450	0.53	-1.8
2,860,402	-		PGA1_c27450	0.53	+0.3
2,860,413	+		PGA1_c27450	0.54	+0.1
2,860,421	-		PGA1_c27450	0.56	+1.4
2,860,472	+		PGA1_c27450	0.63	-0.5
2,860,496	-		PGA1_c27450	0.66	-1.1
2,860,525	-		PGA1_c27450	0.71	+1.4
2,860,576	+		PGA1_c27450	0.78	+2.0
2,860,669	-				+0.8
2,860,696	+				-0.3
2,860,704	-				-0.1
2,860,718	+				+0.5
2,860,723	+				+0.5
2,860,771	-				-1.4
2,860,796	+				-0.9
2,860,796	+				-0.3
2,860,796	+				+2.3
2,860,796	+				-1.0
2,860,804	-				+0.2
2,860,804	-				+1.3
2,860,804	-				-2.0
2,860,847	-				+0.6
2,860,858	-				+1.0
2,860,858	-				-0.5
2,860,858	-				-2.3
2,860,880	-				+1.8
2,860,884	+				+0.5
2,860,889	+				-0.5
2,860,897	-				+1.4
2,860,978	-		PGA1_c27460	0.16	+1.3
2,861,015	-		PGA1_c27460	0.19	+0.7
2,861,021	-		PGA1_c27460	0.20	+0.2
2,861,100	+		PGA1_c27460	0.27	+0.2
2,861,100	+		PGA1_c27460	0.27	+0.5
2,861,100	+		PGA1_c27460	0.27	+0.2
2,861,122	+		PGA1_c27460	0.29	+1.0
2,861,122	+		PGA1_c27460	0.29	+1.0
2,861,122	+		PGA1_c27460	0.29	+1.0
2,861,122	+		PGA1_c27460	0.29	-2.0
2,861,139	-		PGA1_c27460	0.30	-0.8
2,861,152	+		PGA1_c27460	0.31	-1.4
2,861,170	-		PGA1_c27460	0.33	+0.5
2,861,170	-		PGA1_c27460	0.33	-1.7
2,861,170	-		PGA1_c27460	0.33	+1.8
2,861,170	-		PGA1_c27460	0.33	+0.1
2,861,170	-		PGA1_c27460	0.33	-0.5
2,861,170	-		PGA1_c27460	0.33	-1.3
2,861,170	-		PGA1_c27460	0.33	+1.5
2,861,170	-		PGA1_c27460	0.33	-0.0
2,861,170	-		PGA1_c27460	0.33	-1.5
2,861,180	-		PGA1_c27460	0.34	+0.8
2,861,181	-		PGA1_c27460	0.34	+0.1
2,861,188	+		PGA1_c27460	0.34	+1.0
2,861,189	+		PGA1_c27460	0.34	-0.5
2,861,196	+		PGA1_c27460	0.35	-0.1
2,861,217	+		PGA1_c27460	0.37	+0.1
2,861,225	-		PGA1_c27460	0.38	+1.2
2,861,230	-		PGA1_c27460	0.38	-0.5
2,861,238	+		PGA1_c27460	0.39	+1.1
2,861,245	+		PGA1_c27460	0.39	-1.4
2,861,260	-		PGA1_c27460	0.41	-1.0
2,861,327	+		PGA1_c27460	0.47	-0.8
2,861,335	-		PGA1_c27460	0.47	-0.6
2,861,448	+		PGA1_c27460	0.57	+0.5
2,861,458	+		PGA1_c27460	0.58	+0.1
2,861,506	-		PGA1_c27460	0.63	+2.9
2,861,508	+		PGA1_c27460	0.63	+3.1
2,861,516	-		PGA1_c27460	0.63	-1.8
2,861,516	-		PGA1_c27460	0.63	-1.5
2,861,516	-		PGA1_c27460	0.63	+0.1
2,861,521	-		PGA1_c27460	0.64	-2.6
2,861,540	-		PGA1_c27460	0.66	+0.0
2,861,540	-		PGA1_c27460	0.66	-0.6
2,861,581	+		PGA1_c27460	0.69	+0.8
2,861,589	-		PGA1_c27460	0.70	+1.0
2,861,631	+		PGA1_c27460	0.74	-1.2
2,861,636	+		PGA1_c27460	0.74	-0.1
2,861,636	+		PGA1_c27460	0.74	-1.3
2,861,639	-		PGA1_c27460	0.74	-2.2
2,861,639	-		PGA1_c27460	0.74	-1.0
2,861,639	-		PGA1_c27460	0.74	+0.7
2,861,644	-		PGA1_c27460	0.75	-0.3
2,861,677	-		PGA1_c27460	0.78	+0.4
2,861,715	+		PGA1_c27460	0.81	+1.1