Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27310

Experiment: m.b. Chloramphenicol 0.00002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.00002 mg/ml
2,844,652	+				-0.1
2,844,655	-				+0.6
2,844,699	+				+1.1
2,844,717	-				+0.1
2,844,725	-				+0.6
2,844,758	+				-1.2
2,844,834	-				-0.3
2,844,860	+		PGA1_c27300	0.12	+1.0
2,844,897	-		PGA1_c27300	0.16	+0.4
2,844,926	-		PGA1_c27300	0.19	-0.5
2,844,949	-		PGA1_c27300	0.22	-2.4
2,844,951	+		PGA1_c27300	0.22	-0.2
2,844,951	+		PGA1_c27300	0.22	-0.1
2,844,957	-		PGA1_c27300	0.23	-0.1
2,844,959	+		PGA1_c27300	0.23	+1.4
2,844,959	+		PGA1_c27300	0.23	+0.8
2,844,959	+		PGA1_c27300	0.23	-1.1
2,844,965	-		PGA1_c27300	0.24	+0.1
2,844,967	-		PGA1_c27300	0.24	+1.7
2,844,967	-		PGA1_c27300	0.24	+0.0
2,844,967	-		PGA1_c27300	0.24	-0.5
2,844,967	-		PGA1_c27300	0.24	-0.2
2,844,985	+		PGA1_c27300	0.26	+1.4
2,845,002	-		PGA1_c27300	0.28	-1.1
2,845,016	+		PGA1_c27300	0.30	+0.4
2,845,024	-		PGA1_c27300	0.30	-0.5
2,845,033	-		PGA1_c27300	0.31	+0.4
2,845,035	+		PGA1_c27300	0.32	+1.6
2,845,047	+		PGA1_c27300	0.33	-1.2
2,845,047	+		PGA1_c27300	0.33	-0.4
2,845,048	-		PGA1_c27300	0.33	-0.2
2,845,055	-		PGA1_c27300	0.34	-0.5
2,845,055	-		PGA1_c27300	0.34	-0.4
2,845,064	-		PGA1_c27300	0.35	+0.0
2,845,093	-		PGA1_c27300	0.38	+0.0
2,845,098	-		PGA1_c27300	0.39	-0.1
2,845,154	+		PGA1_c27300	0.45	+1.3
2,845,167	+		PGA1_c27300	0.47	-0.6
2,845,300	-		PGA1_c27300	0.62	+0.6
2,845,300	-		PGA1_c27300	0.62	-0.1
2,845,368	+		PGA1_c27300	0.70	-0.8
2,845,374	+		PGA1_c27300	0.71	+1.0
2,845,384	+		PGA1_c27300	0.72	+0.7
2,845,392	-		PGA1_c27300	0.73	-0.6
2,845,448	+		PGA1_c27300	0.79	-1.4
2,845,463	+		PGA1_c27300	0.81	-2.2
2,845,471	-		PGA1_c27300	0.82	+0.2
2,845,481	+		PGA1_c27300	0.83	+0.3
2,845,481	+		PGA1_c27300	0.83	-0.9
2,845,524	+		PGA1_c27300	0.88	-0.4
2,845,532	-		PGA1_c27300	0.89	+0.5
2,845,532	-		PGA1_c27300	0.89	-0.3
2,845,541	+				+0.0
2,845,577	+				+2.4
2,845,577	+				-0.4
2,845,577	+				+2.3
2,845,585	-				+0.4
2,845,585	-				-0.1
2,845,597	-				-0.1
2,845,605	+				+1.0
2,845,658	+				-0.7
2,845,665	+				+0.5
2,845,666	-				-0.8
2,845,673	-				+0.9
2,845,673	-				-1.5
2,845,673	-				-0.1
2,845,699	-				+0.2
2,845,808	-		PGA1_c27310	0.18	+0.3
2,845,845	+		PGA1_c27310	0.22	+1.0
2,845,876	+		PGA1_c27310	0.25	-0.2
2,845,949	-		PGA1_c27310	0.33	+0.7
2,845,950	-		PGA1_c27310	0.33	+0.7
2,845,962	+		PGA1_c27310	0.34	+1.6
2,845,985	+		PGA1_c27310	0.36	+1.5
2,845,995	+		PGA1_c27310	0.37	-0.3
2,845,998	-		PGA1_c27310	0.37	+1.4
2,845,998	-		PGA1_c27310	0.37	-0.0
2,846,020	-		PGA1_c27310	0.40	+1.3
2,846,067	-		PGA1_c27310	0.44	-3.0
2,846,254	-		PGA1_c27310	0.63	-0.1
2,846,272	-		PGA1_c27310	0.65	+0.8
2,846,274	-		PGA1_c27310	0.65	-0.6
2,846,296	+		PGA1_c27310	0.67	+0.9
2,846,361	-		PGA1_c27310	0.74	-0.5
2,846,439	-		PGA1_c27310	0.81	-0.0
2,846,439	-		PGA1_c27310	0.81	+0.2
2,846,578	+				+0.2
2,846,696	-				+1.6
2,846,702	+				-0.1
2,846,773	-				+0.8
2,846,773	-				+0.4
2,846,773	-				-0.8
2,846,773	-				-0.2
2,846,773	-				-0.2
2,846,791	+				+0.3
2,846,809	-				-0.7
2,846,984	-		PGA1_c27320	0.22	-0.0
2,847,005	+		PGA1_c27320	0.24	+0.5
2,847,005	+		PGA1_c27320	0.24	+0.6
2,847,011	-		PGA1_c27320	0.24	-0.3
2,847,040	+		PGA1_c27320	0.27	+0.6
2,847,053	+		PGA1_c27320	0.28	+0.8
2,847,068	+		PGA1_c27320	0.30	+0.3
2,847,076	-		PGA1_c27320	0.30	+1.3
2,847,076	-		PGA1_c27320	0.30	+0.5
2,847,124	-		PGA1_c27320	0.35	+0.2
2,847,184	+		PGA1_c27320	0.41	+0.0
2,847,184	+		PGA1_c27320	0.41	+0.2
2,847,184	+		PGA1_c27320	0.41	-0.1
2,847,184	+		PGA1_c27320	0.41	+0.4
2,847,184	+		PGA1_c27320	0.41	-2.2
2,847,192	-		PGA1_c27320	0.41	-0.1
2,847,192	-		PGA1_c27320	0.41	-0.3
2,847,192	-		PGA1_c27320	0.41	-0.0
2,847,192	-		PGA1_c27320	0.41	+0.9
2,847,192	-		PGA1_c27320	0.41	+0.2
2,847,248	-		PGA1_c27320	0.47	-0.1
2,847,273	-		PGA1_c27320	0.49	-1.0
2,847,296	+		PGA1_c27320	0.51	-0.9
2,847,296	+		PGA1_c27320	0.51	+0.5
2,847,296	+		PGA1_c27320	0.51	+0.3
2,847,296	+		PGA1_c27320	0.51	-1.0
2,847,304	-		PGA1_c27320	0.52	+1.3
2,847,304	-		PGA1_c27320	0.52	+0.4
2,847,314	-		PGA1_c27320	0.53	+0.0
2,847,353	+		PGA1_c27320	0.57	+0.3
2,847,378	+		PGA1_c27320	0.59	+0.6
2,847,394	-		PGA1_c27320	0.61	-0.6
2,847,399	+		PGA1_c27320	0.61	-0.6
2,847,612	+		PGA1_c27320	0.81	-2.0
2,847,624	+		PGA1_c27320	0.82	+0.6