Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c20600

Experiment: m.b. Chloramphenicol 0.00002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.00002 mg/ml
2,134,348	+		PGA1_c20580	0.31	+0.0
2,134,364	-		PGA1_c20580	0.33	-0.3
2,134,438	+		PGA1_c20580	0.41	+0.2
2,134,451	-		PGA1_c20580	0.43	-0.1
2,134,471	-		PGA1_c20580	0.45	+1.6
2,134,489	+		PGA1_c20580	0.47	-0.7
2,134,497	+		PGA1_c20580	0.48	-1.5
2,134,562	-		PGA1_c20580	0.55	-1.0
2,134,598	-		PGA1_c20580	0.59	+1.5
2,134,635	-		PGA1_c20580	0.63	+0.5
2,134,673	+		PGA1_c20580	0.67	-0.8
2,134,696	-		PGA1_c20580	0.70	-2.1
2,134,696	-		PGA1_c20580	0.70	-0.3
2,134,696	-		PGA1_c20580	0.70	+0.7
2,134,701	-		PGA1_c20580	0.71	-0.2
2,134,773	-		PGA1_c20580	0.79	-0.8
2,134,783	-		PGA1_c20580	0.80	+0.9
2,134,848	-		PGA1_c20580	0.87	-0.1
2,134,854	-		PGA1_c20580	0.88	+0.0
2,134,931	+				-0.8
2,134,972	-				+0.2
2,135,069	+		PGA1_c20590	0.39	-1.0
2,135,111	+		PGA1_c20590	0.54	-0.4
2,135,111	+		PGA1_c20590	0.54	+0.7
2,135,111	+		PGA1_c20590	0.54	-0.4
2,135,111	+		PGA1_c20590	0.54	+0.6
2,135,111	+		PGA1_c20590	0.54	+0.8
2,135,119	-		PGA1_c20590	0.57	+0.3
2,135,119	-		PGA1_c20590	0.57	+0.8
2,135,119	-		PGA1_c20590	0.57	-1.4
2,135,207	-		PGA1_c20590	0.89	+2.0
2,135,244	+				+0.1
2,135,293	+				-2.0
2,135,301	-				-1.6
2,135,487	-		PGA1_c20600	0.24	+0.4
2,135,504	-		PGA1_c20600	0.26	-0.4
2,135,590	-		PGA1_c20600	0.39	+2.8
2,135,595	+		PGA1_c20600	0.40	+0.5
2,135,613	+		PGA1_c20600	0.42	+1.0
2,135,670	+		PGA1_c20600	0.51	+0.2
2,135,726	+		PGA1_c20600	0.59	+0.6
2,135,734	-		PGA1_c20600	0.60	+1.0
2,135,741	+		PGA1_c20600	0.61	+0.4
2,135,749	-		PGA1_c20600	0.62	-0.5
2,135,767	-		PGA1_c20600	0.65	+2.3
2,135,782	+		PGA1_c20600	0.67	-0.4
2,135,936	-				+1.7
2,135,938	+				+0.5
2,135,946	-				+0.8
2,136,009	+				+0.5
2,136,109	+				+0.8
2,136,109	+				-1.0
2,136,109	+				-1.6
2,136,109	+				-0.4
2,136,117	-				-0.1
2,136,166	+		PGA1_c20610	0.14	+1.1
2,136,168	+		PGA1_c20610	0.14	+0.1
2,136,168	+		PGA1_c20610	0.14	-1.1
2,136,168	+		PGA1_c20610	0.14	+1.7
2,136,168	+		PGA1_c20610	0.14	-0.8
2,136,168	+		PGA1_c20610	0.14	+1.0
2,136,176	-		PGA1_c20610	0.15	-0.1
2,136,273	-		PGA1_c20610	0.23	+0.0
2,136,275	+		PGA1_c20610	0.23	+1.5
2,136,283	-		PGA1_c20610	0.23	-1.2
2,136,283	-		PGA1_c20610	0.23	+1.8
2,136,290	-		PGA1_c20610	0.24	+0.8
2,136,404	+		PGA1_c20610	0.33	-0.4
2,136,409	+		PGA1_c20610	0.34	-1.1
2,136,412	-		PGA1_c20610	0.34	+0.8
2,136,412	-		PGA1_c20610	0.34	-0.4
2,136,489	+		PGA1_c20610	0.40	-2.0
2,136,494	+		PGA1_c20610	0.41	-0.4
2,136,509	+		PGA1_c20610	0.42	+0.8
2,136,595	+		PGA1_c20610	0.49	+0.5
2,136,634	+		PGA1_c20610	0.52	-0.2
2,136,634	+		PGA1_c20610	0.52	+0.2
2,136,635	+		PGA1_c20610	0.52	-0.1
2,136,719	-		PGA1_c20610	0.59	+0.9
2,136,720	-		PGA1_c20610	0.59	-0.4
2,136,746	-		PGA1_c20610	0.62	+1.3
2,136,835	-		PGA1_c20610	0.69	-0.6
2,136,866	+		PGA1_c20610	0.72	+0.0
2,136,900	-		PGA1_c20610	0.74	-1.1
2,136,972	+		PGA1_c20610	0.80	-1.2
2,136,982	+		PGA1_c20610	0.81	-0.6
2,136,982	+		PGA1_c20610	0.81	-1.3
2,136,990	-		PGA1_c20610	0.82	+0.2