Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c20150

Experiment: m.b. Chloramphenicol 0.00002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.00002 mg/ml
2,088,158	-				+0.1
2,088,192	-				-1.6
2,088,296	+				+0.7
2,088,296	+				+0.3
2,088,296	+				-0.5
2,088,299	+				+1.7
2,088,317	+				+0.5
2,088,317	+				+1.0
2,088,325	-				-1.4
2,088,356	+		PGA1_c20140	0.11	+1.5
2,088,366	+		PGA1_c20140	0.12	+1.1
2,088,374	-		PGA1_c20140	0.13	+1.6
2,088,374	-		PGA1_c20140	0.13	-0.4
2,088,387	-		PGA1_c20140	0.15	+1.4
2,088,387	-		PGA1_c20140	0.15	+0.9
2,088,387	-		PGA1_c20140	0.15	+1.0
2,088,387	-		PGA1_c20140	0.15	+0.9
2,088,443	-		PGA1_c20140	0.21	+1.7
2,088,541	+		PGA1_c20140	0.33	+1.2
2,088,593	-		PGA1_c20140	0.40	+0.5
2,088,599	+		PGA1_c20140	0.40	+1.4
2,088,609	+		PGA1_c20140	0.42	+0.8
2,088,617	-		PGA1_c20140	0.43	+0.1
2,088,790	+		PGA1_c20140	0.64	+0.4
2,088,790	-		PGA1_c20140	0.64	-0.4
2,088,875	+		PGA1_c20140	0.74	+0.9
2,088,883	-		PGA1_c20140	0.75	+0.7
2,088,900	+		PGA1_c20140	0.77	+0.8
2,088,908	-		PGA1_c20140	0.78	-0.3
2,088,910	+		PGA1_c20140	0.78	+2.3
2,088,943	+		PGA1_c20140	0.82	+1.8
2,088,953	-		PGA1_c20140	0.83	+0.8
2,089,016	+				+1.4
2,089,076	+				+0.6
2,089,093	+				-0.7
2,089,101	-				-0.4
2,089,101	-				-0.9
2,089,123	-				-0.1
2,089,192	+		PGA1_c20150	0.26	+0.1
2,089,228	+		PGA1_c20150	0.35	-0.2
2,089,232	+		PGA1_c20150	0.36	-0.7
2,089,240	-		PGA1_c20150	0.38	+0.3
2,089,245	-		PGA1_c20150	0.40	-0.7
2,089,271	+		PGA1_c20150	0.46	-0.7
2,089,271	+		PGA1_c20150	0.46	-0.4
2,089,279	-		PGA1_c20150	0.48	+0.4
2,089,279	-		PGA1_c20150	0.48	-1.6
2,089,279	-		PGA1_c20150	0.48	-1.5
2,089,358	+		PGA1_c20150	0.69	-1.2
2,089,376	-		PGA1_c20150	0.74	-0.2
2,089,402	+		PGA1_c20150	0.80	-0.9
2,089,408	+		PGA1_c20150	0.82	-1.2
2,089,416	-		PGA1_c20150	0.84	+0.1
2,089,439	+				+0.3
2,089,478	-				-0.1
2,089,490	+				+0.9
2,089,490	+				-0.0
2,089,554	+				+2.8
2,089,636	-				-0.2
2,089,640	+				-1.0
2,089,690	+				+0.6
2,089,721	-				+0.5
2,089,728	-				-0.6
2,089,759	-				-0.2
2,089,762	+				+0.5
2,089,776	+				-1.9
2,089,779	-				-1.1
2,089,826	+				-0.2
2,089,954	-		PGA1_c20160	0.14	+1.1
2,090,029	-		PGA1_c20160	0.17	-0.6
2,090,043	+		PGA1_c20160	0.18	-0.7
2,090,051	+		PGA1_c20160	0.18	-0.7
2,090,123	-		PGA1_c20160	0.21	+0.7
2,090,128	+		PGA1_c20160	0.21	+0.5
2,090,136	-		PGA1_c20160	0.22	+0.3
2,090,149	+		PGA1_c20160	0.22	-1.1
2,090,157	-		PGA1_c20160	0.23	+0.9
2,090,158	+		PGA1_c20160	0.23	+0.4
2,090,166	-		PGA1_c20160	0.23	+1.7
2,090,183	-		PGA1_c20160	0.24	-0.3
2,090,193	-		PGA1_c20160	0.24	-0.7
2,090,249	+		PGA1_c20160	0.26	+0.3
2,090,249	+		PGA1_c20160	0.26	-0.1
2,090,257	-		PGA1_c20160	0.27	+0.1
2,090,257	-		PGA1_c20160	0.27	+0.8
2,090,278	-		PGA1_c20160	0.28	+0.5
2,090,293	-		PGA1_c20160	0.28	+1.6
2,090,400	+		PGA1_c20160	0.33	-2.3
2,090,427	-		PGA1_c20160	0.34	-0.2
2,090,429	-		PGA1_c20160	0.34	+2.0
2,090,461	+		PGA1_c20160	0.35	+0.3