Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c19610

Experiment: m.b. Chloramphenicol 0.00002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.00002 mg/ml
2,034,672	-		PGA1_c19590	0.46	+0.9
2,034,674	+		PGA1_c19590	0.47	+0.8
2,034,687	-		PGA1_c19590	0.48	+0.6
2,034,694	+		PGA1_c19590	0.49	-1.1
2,034,745	+		PGA1_c19590	0.56	-0.1
2,034,745	+		PGA1_c19590	0.56	-1.3
2,034,745	+		PGA1_c19590	0.56	-0.2
2,034,753	-		PGA1_c19590	0.58	-0.3
2,034,771	-		PGA1_c19590	0.60	-0.4
2,034,771	-		PGA1_c19590	0.60	+0.4
2,034,875	-		PGA1_c19590	0.74	-0.5
2,034,885	+		PGA1_c19590	0.76	+1.1
2,034,893	-		PGA1_c19590	0.77	-0.3
2,034,895	-		PGA1_c19590	0.77	-0.0
2,034,897	+		PGA1_c19590	0.77	+0.5
2,034,897	+		PGA1_c19590	0.77	+0.3
2,034,902	+		PGA1_c19590	0.78	-0.9
2,034,905	-		PGA1_c19590	0.78	+0.2
2,034,905	-		PGA1_c19590	0.78	-0.0
2,034,905	-		PGA1_c19590	0.78	-0.6
2,034,912	-		PGA1_c19590	0.79	+0.3
2,034,914	+		PGA1_c19590	0.80	+0.3
2,034,914	+		PGA1_c19590	0.80	-0.6
2,034,922	-		PGA1_c19590	0.81	+0.3
2,034,922	-		PGA1_c19590	0.81	+0.8
2,034,922	-		PGA1_c19590	0.81	-0.2
2,034,966	+		PGA1_c19590	0.87	-0.1
2,034,974	-		PGA1_c19590	0.88	-0.7
2,034,979	+		PGA1_c19590	0.88	+2.2
2,034,991	+				+0.6
2,034,991	+				+1.5
2,034,999	-				+0.6
2,035,035	+				-1.7
2,035,035	+				-0.1
2,035,035	+				-0.3
2,035,035	+				+1.0
2,035,043	-				-1.1
2,035,053	+				+0.9
2,035,063	-				+0.2
2,035,098	+				-1.2
2,035,112	-				+0.8
2,035,112	-				+1.2
2,035,117	-				-1.4
2,035,122	-				-0.2
2,035,148	+				-1.0
2,035,153	+				+2.2
2,035,156	-				-0.0
2,035,156	-				-0.6
2,035,157	-				+0.6
2,035,161	-				+0.3
2,035,186	+		PGA1_c19600	0.12	+3.4
2,035,198	+		PGA1_c19600	0.15	-0.1
2,035,198	+		PGA1_c19600	0.15	-1.1
2,035,198	+		PGA1_c19600	0.15	+0.5
2,035,198	+		PGA1_c19600	0.15	+0.7
2,035,202	+		PGA1_c19600	0.15	-1.2
2,035,232	+		PGA1_c19600	0.21	+0.5
2,035,268	+		PGA1_c19600	0.29	+0.8
2,035,356	+		PGA1_c19600	0.46	-1.1
2,035,364	-		PGA1_c19600	0.48	+0.0
2,035,364	-		PGA1_c19600	0.48	-0.5
2,035,364	-		PGA1_c19600	0.48	+1.9
2,035,428	+		PGA1_c19600	0.61	+1.0
2,035,436	-		PGA1_c19600	0.63	+0.5
2,035,436	-		PGA1_c19600	0.63	+0.2
2,035,473	+		PGA1_c19600	0.70	+1.6
2,035,481	-		PGA1_c19600	0.72	+0.6
2,035,484	+		PGA1_c19600	0.72	-0.8
2,035,487	-		PGA1_c19600	0.73	-0.3
2,035,487	-		PGA1_c19600	0.73	-0.4
2,035,487	-		PGA1_c19600	0.73	+0.8
2,035,489	+		PGA1_c19600	0.73	+0.2
2,035,497	-		PGA1_c19600	0.75	-1.0
2,035,564	+		PGA1_c19600	0.88	+0.3
2,035,572	-				-1.3
2,035,600	+				-0.1
2,035,600	+				-0.4
2,035,618	-				-1.2
2,035,645	-				+0.6
2,035,715	+		PGA1_c19610	0.43	+1.0
2,035,772	+		PGA1_c19610	0.75	+0.7
2,035,779	-		PGA1_c19610	0.79	+0.1
2,035,780	-		PGA1_c19610	0.80	-2.1
2,035,787	-		PGA1_c19610	0.84	+0.5
2,035,795	+		PGA1_c19610	0.89	+1.3
2,035,808	+				-2.1
2,035,808	+				-0.4
2,035,809	+				-0.4
2,035,817	-				-0.0
2,035,943	-				-0.0
2,035,943	-				+0.4
2,035,967	+				+1.0
2,035,967	+				-0.5
2,035,975	-				-0.5
2,035,975	-				-0.4
2,035,975	-				-0.3
2,035,985	-				+0.2
2,036,004	-				-0.8
2,036,072	+				-0.5
2,036,146	-				+0.2
2,036,156	-				+0.7
2,036,168	+				+0.1
2,036,176	-				-0.8
2,036,177	-				+1.2
2,036,192	-				-0.4
2,036,240	-				-0.2
2,036,245	+				+0.1
2,036,364	+		PGA1_c19620	0.12	+0.7
2,036,380	-		PGA1_c19620	0.13	+0.6
2,036,460	+		PGA1_c19620	0.16	-0.2
2,036,556	-		PGA1_c19620	0.19	-0.1
2,036,678	-		PGA1_c19620	0.24	+0.7
2,036,723	-		PGA1_c19620	0.25	-0.4
2,036,755	-		PGA1_c19620	0.27	+1.4
2,036,786	+		PGA1_c19620	0.28	-0.2