Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c18220

Experiment: m.b. Chloramphenicol 0.00002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.00002 mg/ml
1,905,573	-				-0.3
1,905,620	-				+1.3
1,905,690	-		PGA1_c18210	0.13	+0.9
1,905,739	+		PGA1_c18210	0.18	-0.7
1,905,763	+		PGA1_c18210	0.20	-2.3
1,905,781	-		PGA1_c18210	0.22	+1.7
1,905,815	+		PGA1_c18210	0.25	-0.3
1,905,815	+		PGA1_c18210	0.25	+0.1
1,905,825	+		PGA1_c18210	0.26	+1.1
1,905,858	-		PGA1_c18210	0.29	-0.7
1,905,900	+		PGA1_c18210	0.34	+0.3
1,905,959	-		PGA1_c18210	0.39	+1.0
1,906,011	-		PGA1_c18210	0.45	+1.0
1,906,021	+		PGA1_c18210	0.46	-1.6
1,906,021	+		PGA1_c18210	0.46	+1.1
1,906,057	+		PGA1_c18210	0.49	+0.8
1,906,093	-		PGA1_c18210	0.53	-0.6
1,906,114	+		PGA1_c18210	0.55	+2.1
1,906,117	-		PGA1_c18210	0.55	-0.1
1,906,175	-		PGA1_c18210	0.61	+1.3
1,906,175	-		PGA1_c18210	0.61	+0.1
1,906,193	-		PGA1_c18210	0.63	-2.7
1,906,196	+		PGA1_c18210	0.63	-1.2
1,906,223	-		PGA1_c18210	0.66	-0.2
1,906,237	-		PGA1_c18210	0.67	-0.6
1,906,242	-		PGA1_c18210	0.68	-0.3
1,906,265	+		PGA1_c18210	0.70	-0.1
1,906,315	-		PGA1_c18210	0.75	-1.5
1,906,317	-		PGA1_c18210	0.75	-0.4
1,906,331	+		PGA1_c18210	0.76	-0.0
1,906,334	-		PGA1_c18210	0.77	-1.0
1,906,334	-		PGA1_c18210	0.77	+1.0
1,906,354	+		PGA1_c18210	0.79	+1.0
1,906,366	-		PGA1_c18210	0.80	-1.3
1,906,374	+		PGA1_c18210	0.81	-2.1
1,906,420	+		PGA1_c18210	0.85	+0.8
1,906,434	+		PGA1_c18210	0.87	-0.7
1,906,442	-		PGA1_c18210	0.87	-1.5
1,906,444	+		PGA1_c18210	0.88	+0.8
1,906,454	-		PGA1_c18210	0.89	+0.1
1,906,565	-				+0.6
1,906,657	+		PGA1_c18220	0.44	+2.0
1,906,657	+		PGA1_c18220	0.44	-0.0
1,906,657	+		PGA1_c18220	0.44	+1.2
1,906,696	-		PGA1_c18220	0.62	+0.6
1,906,707	+				-0.8
1,906,745	-		PGA1_c18220	0.84	+0.4
1,906,747	+		PGA1_c18220	0.85	+1.1
1,906,747	+		PGA1_c18220	0.85	+0.4
1,906,747	+		PGA1_c18220	0.85	+0.3
1,906,755	-				+1.7
1,906,755	-				+1.1
1,906,757	+				+0.3
1,906,757	+				+0.3
1,906,757	+				+0.4
1,906,757	+				-1.3
1,906,757	+				+0.9
1,906,757	+				+1.7
1,906,763	-				-2.4
1,906,765	-				+0.5
1,906,765	-				-0.4
1,906,884	+		PGA1_c18230	0.33	-1.1
1,906,892	-		PGA1_c18230	0.35	+1.2
1,906,898	-		PGA1_c18230	0.36	+1.1
1,906,956	+		PGA1_c18230	0.50	+0.0
1,906,956	+		PGA1_c18230	0.50	+0.3
1,906,963	-		PGA1_c18230	0.52	-0.2
1,906,963	-		PGA1_c18230	0.52	+0.4
1,907,052	-		PGA1_c18230	0.74	-0.5
1,907,055	+		PGA1_c18230	0.74	+0.5
1,907,063	-		PGA1_c18230	0.76	+0.4
1,907,063	-		PGA1_c18230	0.76	+0.6
1,907,094	+		PGA1_c18230	0.84	+0.8
1,907,129	-				+0.3
1,907,131	+				-0.8
1,907,218	-				-0.2
1,907,218	-				+0.6
1,907,234	+				-0.1
1,907,274	+				+1.3
1,907,293	-				-0.5
1,907,322	+				+0.1
1,907,335	-				+0.4
1,907,335	-				-0.9
1,907,337	+				+0.3
1,907,345	-				-2.8
1,907,368	-				+0.4
1,907,466	-		PGA1_c18240	0.12	-0.7
1,907,537	+		PGA1_c18240	0.15	+0.2
1,907,545	+		PGA1_c18240	0.15	-0.4
1,907,613	+		PGA1_c18240	0.18	+0.4
1,907,650	+		PGA1_c18240	0.20	-1.6
1,907,653	-		PGA1_c18240	0.20	-0.1
1,907,653	-		PGA1_c18240	0.20	-0.2
1,907,684	+		PGA1_c18240	0.21	-1.1
1,907,706	+		PGA1_c18240	0.22	+0.7
1,907,780	+		PGA1_c18240	0.25	+0.2
1,907,780	+		PGA1_c18240	0.25	+0.4
1,907,780	+		PGA1_c18240	0.25	+0.4