Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c12990

Experiment: m.b. Chloramphenicol 0.00002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.00002 mg/ml
1,343,533	-		PGA1_c12980	0.39	-0.4
1,343,589	+		PGA1_c12980	0.43	+0.5
1,343,589	+		PGA1_c12980	0.43	-0.2
1,343,589	+		PGA1_c12980	0.43	+0.9
1,343,589	+		PGA1_c12980	0.43	-0.2
1,343,597	-		PGA1_c12980	0.44	-0.4
1,343,633	+		PGA1_c12980	0.46	-0.4
1,343,652	-		PGA1_c12980	0.48	+0.3
1,343,742	+		PGA1_c12980	0.54	+0.4
1,343,744	-		PGA1_c12980	0.54	+0.8
1,343,757	+		PGA1_c12980	0.55	+0.6
1,343,770	-		PGA1_c12980	0.56	-0.9
1,343,780	-		PGA1_c12980	0.57	+0.6
1,343,859	+		PGA1_c12980	0.62	-0.2
1,343,898	+		PGA1_c12980	0.65	-0.8
1,343,898	+		PGA1_c12980	0.65	+0.4
1,343,898	+		PGA1_c12980	0.65	-0.0
1,343,898	+		PGA1_c12980	0.65	+0.9
1,343,906	-		PGA1_c12980	0.66	+0.5
1,343,906	-		PGA1_c12980	0.66	-0.6
1,343,906	-		PGA1_c12980	0.66	+0.4
1,343,906	-		PGA1_c12980	0.66	+0.1
1,343,906	-		PGA1_c12980	0.66	-0.2
1,343,916	-		PGA1_c12980	0.67	+0.5
1,344,013	+		PGA1_c12980	0.73	+0.3
1,344,020	+		PGA1_c12980	0.74	+0.1
1,344,140	+		PGA1_c12980	0.83	-0.1
1,344,140	+		PGA1_c12980	0.83	+1.0
1,344,140	+		PGA1_c12980	0.83	+0.0
1,344,140	+		PGA1_c12980	0.83	-0.3
1,344,140	+		PGA1_c12980	0.83	-0.8
1,344,140	+		PGA1_c12980	0.83	+0.6
1,344,140	+		PGA1_c12980	0.83	+1.3
1,344,141	-		PGA1_c12980	0.83	+0.5
1,344,148	-		PGA1_c12980	0.83	+0.1
1,344,148	-		PGA1_c12980	0.83	-1.1
1,344,150	+		PGA1_c12980	0.83	-0.3
1,344,153	-		PGA1_c12980	0.83	-0.8
1,344,154	+		PGA1_c12980	0.84	+0.6
1,344,237	-		PGA1_c12980	0.89	+0.8
1,344,237	-		PGA1_c12980	0.89	+0.0
1,344,237	-		PGA1_c12980	0.89	+0.2
1,344,309	-				+0.8
1,344,311	-				-0.2
1,344,361	-				-0.2
1,344,378	+				+0.4
1,344,378	+				-2.1
1,344,434	+				-0.8
1,344,442	-				-2.1
1,344,442	-				-1.8
1,344,489	+				+0.5
1,344,558	-		PGA1_c12990	0.11	+0.5
1,344,607	+		PGA1_c12990	0.21	+0.5
1,344,614	+		PGA1_c12990	0.22	+0.9
1,344,615	-		PGA1_c12990	0.23	-0.8
1,344,615	-		PGA1_c12990	0.23	+0.0
1,344,644	+		PGA1_c12990	0.29	-0.4
1,344,662	-		PGA1_c12990	0.32	+1.1
1,344,662	-		PGA1_c12990	0.32	-0.3
1,344,799	+		PGA1_c12990	0.61	-2.4
1,344,799	+		PGA1_c12990	0.61	-0.3
1,344,807	-		PGA1_c12990	0.63	+2.4
1,344,830	+		PGA1_c12990	0.68	+1.4
1,344,889	+		PGA1_c12990	0.80	+2.0
1,344,889	+		PGA1_c12990	0.80	-0.3
1,344,889	+		PGA1_c12990	0.80	+0.3
1,344,897	-		PGA1_c12990	0.82	-0.2
1,344,897	-		PGA1_c12990	0.82	-1.8
1,344,897	-		PGA1_c12990	0.82	+0.7
1,344,909	+		PGA1_c12990	0.85	+1.0
1,344,909	+		PGA1_c12990	0.85	+1.1
1,344,917	-		PGA1_c12990	0.86	+0.6
1,344,954	-				-0.2
1,344,959	-				-0.8
1,344,976	+				+1.0
1,344,978	-				+1.1
1,344,983	-				-1.0
1,344,984	-				+0.0
1,345,025	-				+0.4
1,345,041	+				+1.6
1,345,051	+				+1.2
1,345,054	+				-0.9
1,345,127	+				-0.6
1,345,155	+				-0.0
1,345,213	-		PGA1_c13000	0.12	-1.6
1,345,213	-		PGA1_c13000	0.12	+2.2
1,345,250	-		PGA1_c13000	0.22	-0.2
1,345,250	-		PGA1_c13000	0.22	+1.1
1,345,250	-		PGA1_c13000	0.22	-0.4
1,345,253	+		PGA1_c13000	0.23	+0.1
1,345,253	+		PGA1_c13000	0.23	-1.3
1,345,253	+		PGA1_c13000	0.23	-0.2
1,345,253	+		PGA1_c13000	0.23	+0.1
1,345,253	+		PGA1_c13000	0.23	-0.9
1,345,261	-		PGA1_c13000	0.25	+1.3
1,345,261	-		PGA1_c13000	0.25	-1.2
1,345,332	+		PGA1_c13000	0.44	-1.4
1,345,341	+		PGA1_c13000	0.47	-0.9
1,345,375	+		PGA1_c13000	0.56	-2.1
1,345,426	+		PGA1_c13000	0.70	-1.2
1,345,502	+				-1.0
1,345,512	-				+1.3
1,345,514	-				+0.3
1,345,557	-				-0.4
1,345,564	+				-0.7
1,345,580	+				-1.9
1,345,633	+				-0.2
1,345,654	+				-1.0
1,345,668	+				-0.4
1,345,696	-				-0.5
1,345,745	-				+1.3
1,345,776	+		PGA1_c13010	0.13	-0.8
1,345,786	+		PGA1_c13010	0.14	+0.5
1,345,794	-		PGA1_c13010	0.15	-1.0
1,345,817	+		PGA1_c13010	0.19	+1.1
1,345,817	+		PGA1_c13010	0.19	-0.9
1,345,820	-		PGA1_c13010	0.19	+0.1
1,345,825	-		PGA1_c13010	0.20	-0.8
1,345,830	-				-0.1
1,345,864	+		PGA1_c13010	0.26	+0.9
1,345,908	+		PGA1_c13010	0.32	+1.3
1,345,928	+		PGA1_c13010	0.35	-0.9
1,345,941	-		PGA1_c13010	0.37	+0.1