Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c11000

Experiment: m.b. Chloramphenicol 0.00002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.00002 mg/ml
1,139,381	+		PGA1_c10990	0.48	+0.3
1,139,381	+		PGA1_c10990	0.48	+0.5
1,139,457	-		PGA1_c10990	0.54	-0.4
1,139,457	-		PGA1_c10990	0.54	-0.1
1,139,625	-		PGA1_c10990	0.66	-3.4
1,139,625	-		PGA1_c10990	0.66	-0.2
1,139,660	+		PGA1_c10990	0.68	+0.7
1,139,705	-		PGA1_c10990	0.71	-0.3
1,139,708	-		PGA1_c10990	0.71	+0.4
1,139,733	-		PGA1_c10990	0.73	+0.3
1,139,802	+		PGA1_c10990	0.78	+2.4
1,139,814	+		PGA1_c10990	0.79	+0.3
1,139,814	-		PGA1_c10990	0.79	+0.5
1,139,820	-		PGA1_c10990	0.79	+0.5
1,139,848	+		PGA1_c10990	0.81	+0.2
1,139,848	+		PGA1_c10990	0.81	-0.2
1,139,848	+		PGA1_c10990	0.81	-1.2
1,139,856	-		PGA1_c10990	0.82	-0.6
1,140,109	+				-0.1
1,140,117	-				+0.9
1,140,147	+				+0.5
1,140,157	+				+0.8
1,140,157	+				+0.2
1,140,157	+				+0.5
1,140,157	+				-0.3
1,140,157	+				+1.6
1,140,157	+				+0.2
1,140,165	-				-1.3
1,140,165	-				-2.1
1,140,165	-				-2.5
1,140,165	-				+1.1
1,140,176	-				+0.2
1,140,235	-				-0.2
1,140,312	+				-0.5
1,140,320	-				-0.1
1,140,340	-				-0.2
1,140,358	-				+0.4
1,140,457	+		PGA1_c11000	0.21	+1.0
1,140,589	+		PGA1_c11000	0.56	-1.8
1,140,589	+		PGA1_c11000	0.56	-0.9
1,140,589	+		PGA1_c11000	0.56	+0.2
1,140,594	+		PGA1_c11000	0.57	-0.2
1,140,597	-		PGA1_c11000	0.58	-0.2
1,140,599	+		PGA1_c11000	0.58	+0.6
1,140,599	+		PGA1_c11000	0.58	+0.9
1,140,607	-		PGA1_c11000	0.60	+0.5
1,140,607	-		PGA1_c11000	0.60	+0.1
1,140,607	-		PGA1_c11000	0.60	+1.2
1,140,607	-		PGA1_c11000	0.60	-0.3
1,140,607	-		PGA1_c11000	0.60	+0.9
1,140,607	-		PGA1_c11000	0.60	+1.8
1,140,607	-		PGA1_c11000	0.60	+0.5
1,141,022	-		PGA1_c11010	0.73	-0.3
1,141,022	-		PGA1_c11010	0.73	+0.2
1,141,119	-				+0.8
1,141,137	-				+0.0
1,141,198	-		PGA1_c11020	0.13	+0.5
1,141,247	-		PGA1_c11020	0.21	+0.5
1,141,253	+		PGA1_c11020	0.22	-0.1
1,141,261	-		PGA1_c11020	0.23	+0.2
1,141,266	+		PGA1_c11020	0.24	-0.5
1,141,289	+		PGA1_c11020	0.28	-0.7
1,141,291	-		PGA1_c11020	0.28	-1.8
1,141,300	+		PGA1_c11020	0.29	+0.5
1,141,300	+		PGA1_c11020	0.29	-1.5
1,141,344	-		PGA1_c11020	0.36	-1.0
1,141,374	-		PGA1_c11020	0.41	+1.0
1,141,415	+		PGA1_c11020	0.47	+0.4
1,141,503	+		PGA1_c11020	0.61	+2.0
1,141,508	+		PGA1_c11020	0.62	-0.0
1,141,508	+		PGA1_c11020	0.62	+2.0
1,141,516	-		PGA1_c11020	0.63	-0.6
1,141,516	-		PGA1_c11020	0.63	+0.0
1,141,526	-		PGA1_c11020	0.65	-0.2
1,141,560	-		PGA1_c11020	0.70	+0.0
1,141,655	+		PGA1_c11020	0.85	-0.4
1,141,685	-		PGA1_c11020	0.90	+1.2
1,141,690	+				+1.2
1,141,742	-				-0.3