Experiment: RCH2_defined_glucose with MS_media 0.5x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06920 and BWI76_RS06925 are separated by 136 nucleotides BWI76_RS06925 and BWI76_RS06930 overlap by 14 nucleotides BWI76_RS06930 and BWI76_RS06935 are separated by 96 nucleotides
BWI76_RS06920: BWI76_RS06920 - paraslipin, at 1,454,041 to 1,454,958
_RS06920
BWI76_RS06925: BWI76_RS06925 - iron ABC transporter ATP-binding protein FetA, at 1,455,095 to 1,455,775
_RS06925
BWI76_RS06930: BWI76_RS06930 - iron export ABC transporter permease subunit FetB, at 1,455,762 to 1,456,544
_RS06930
BWI76_RS06935: BWI76_RS06935 - co-chaperone YbbN, at 1,456,641 to 1,457,495
_RS06935
Position (kb)
1455
1456
1457 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1454.821 kb on + strand, within BWI76_RS06920 at 1454.868 kb on - strand at 1454.868 kb on - strand at 1455.003 kb on - strand at 1455.008 kb on + strand at 1455.008 kb on + strand at 1455.063 kb on + strand at 1455.069 kb on - strand at 1455.152 kb on - strand at 1455.159 kb on + strand at 1455.159 kb on + strand at 1455.159 kb on + strand at 1455.159 kb on + strand at 1455.167 kb on - strand, within BWI76_RS06925 at 1455.167 kb on - strand, within BWI76_RS06925 at 1455.181 kb on + strand, within BWI76_RS06925 at 1455.189 kb on - strand, within BWI76_RS06925 at 1455.189 kb on - strand, within BWI76_RS06925 at 1455.189 kb on - strand, within BWI76_RS06925 at 1455.203 kb on - strand, within BWI76_RS06925 at 1455.215 kb on - strand, within BWI76_RS06925 at 1455.341 kb on + strand, within BWI76_RS06925 at 1455.341 kb on + strand, within BWI76_RS06925 at 1455.349 kb on - strand, within BWI76_RS06925 at 1455.368 kb on - strand, within BWI76_RS06925 at 1455.368 kb on - strand, within BWI76_RS06925 at 1455.375 kb on + strand, within BWI76_RS06925 at 1455.383 kb on + strand, within BWI76_RS06925 at 1455.383 kb on + strand, within BWI76_RS06925 at 1455.383 kb on + strand at 1455.391 kb on - strand, within BWI76_RS06925 at 1455.391 kb on - strand, within BWI76_RS06925 at 1455.470 kb on - strand, within BWI76_RS06925 at 1455.516 kb on - strand, within BWI76_RS06925 at 1455.670 kb on + strand, within BWI76_RS06925 at 1455.677 kb on + strand, within BWI76_RS06925 at 1455.677 kb on + strand, within BWI76_RS06925 at 1455.677 kb on + strand, within BWI76_RS06925 at 1455.685 kb on - strand, within BWI76_RS06925 at 1455.685 kb on - strand, within BWI76_RS06925 at 1455.715 kb on - strand at 1455.789 kb on + strand at 1455.907 kb on - strand, within BWI76_RS06930 at 1455.982 kb on + strand, within BWI76_RS06930 at 1456.071 kb on + strand, within BWI76_RS06930 at 1456.071 kb on + strand, within BWI76_RS06930 at 1456.071 kb on + strand, within BWI76_RS06930 at 1456.079 kb on - strand, within BWI76_RS06930 at 1456.085 kb on - strand at 1456.247 kb on + strand, within BWI76_RS06930 at 1456.444 kb on - strand, within BWI76_RS06930 at 1456.518 kb on - strand at 1456.760 kb on - strand, within BWI76_RS06935 at 1456.840 kb on - strand, within BWI76_RS06935 at 1457.010 kb on + strand, within BWI76_RS06935 at 1457.018 kb on - strand at 1457.088 kb on - strand, within BWI76_RS06935 at 1457.212 kb on - strand, within BWI76_RS06935 at 1457.358 kb on + strand, within BWI76_RS06935 at 1457.451 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with MS_media 0.5x remove 1,454,821 + BWI76_RS06920 0.85 -0.4 1,454,868 - +0.2 1,454,868 - -1.0 1,455,003 - -0.5 1,455,008 + +0.1 1,455,008 + -0.6 1,455,063 + -0.3 1,455,069 - +1.7 1,455,152 - +1.0 1,455,159 + +1.4 1,455,159 + +0.8 1,455,159 + +0.8 1,455,159 + +1.1 1,455,167 - BWI76_RS06925 0.11 +1.7 1,455,167 - BWI76_RS06925 0.11 +1.3 1,455,181 + BWI76_RS06925 0.13 +1.1 1,455,189 - BWI76_RS06925 0.14 +1.5 1,455,189 - BWI76_RS06925 0.14 +1.5 1,455,189 - BWI76_RS06925 0.14 +0.4 1,455,203 - BWI76_RS06925 0.16 +1.6 1,455,215 - BWI76_RS06925 0.18 +1.9 1,455,341 + BWI76_RS06925 0.36 +1.1 1,455,341 + BWI76_RS06925 0.36 +1.5 1,455,349 - BWI76_RS06925 0.37 +1.5 1,455,368 - BWI76_RS06925 0.40 +2.4 1,455,368 - BWI76_RS06925 0.40 +1.4 1,455,375 + BWI76_RS06925 0.41 +1.7 1,455,383 + BWI76_RS06925 0.42 +1.3 1,455,383 + BWI76_RS06925 0.42 +1.1 1,455,383 + +1.5 1,455,391 - BWI76_RS06925 0.43 +1.1 1,455,391 - BWI76_RS06925 0.43 -0.0 1,455,470 - BWI76_RS06925 0.55 +1.6 1,455,516 - BWI76_RS06925 0.62 +1.4 1,455,670 + BWI76_RS06925 0.84 +0.9 1,455,677 + BWI76_RS06925 0.85 +1.6 1,455,677 + BWI76_RS06925 0.85 +1.3 1,455,677 + BWI76_RS06925 0.85 +1.3 1,455,685 - BWI76_RS06925 0.87 +0.9 1,455,685 - BWI76_RS06925 0.87 +1.4 1,455,715 - +1.7 1,455,789 + +2.3 1,455,907 - BWI76_RS06930 0.19 +0.5 1,455,982 + BWI76_RS06930 0.28 +1.5 1,456,071 + BWI76_RS06930 0.39 +1.5 1,456,071 + BWI76_RS06930 0.39 +1.3 1,456,071 + BWI76_RS06930 0.39 +1.2 1,456,079 - BWI76_RS06930 0.40 +1.5 1,456,085 - -1.4 1,456,247 + BWI76_RS06930 0.62 +2.4 1,456,444 - BWI76_RS06930 0.87 +1.0 1,456,518 - +1.6 1,456,760 - BWI76_RS06935 0.14 +0.3 1,456,840 - BWI76_RS06935 0.23 -0.0 1,457,010 + BWI76_RS06935 0.43 -0.5 1,457,018 - +0.5 1,457,088 - BWI76_RS06935 0.52 -0.5 1,457,212 - BWI76_RS06935 0.67 -0.4 1,457,358 + BWI76_RS06935 0.84 -2.5 1,457,451 + +0.0
Or see this region's nucleotide sequence