Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS02125

Experiment: RCH2_defined_glucose with MS_media 0.5x

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS02120 and BWI76_RS02125 overlap by 4 nucleotidesBWI76_RS02125 and BWI76_RS02130 overlap by 1 nucleotides BWI76_RS02120: BWI76_RS02120 - multidrug resistance transporter, at 438,787 to 440,250 _RS02120 BWI76_RS02125: BWI76_RS02125 - multidrug efflux system protein MdtO, at 440,247 to 442,289 _RS02125 BWI76_RS02130: BWI76_RS02130 - multidrug transporter subunit MdtN, at 442,289 to 443,320 _RS02130 Position (kb) 440 441 442 443Strain fitness (log2 ratio) -2 -1 0 1at 439.249 kb on - strand, within BWI76_RS02120at 439.309 kb on + strand, within BWI76_RS02120at 439.388 kb on - strand, within BWI76_RS02120at 439.582 kb on - strand, within BWI76_RS02120at 439.582 kb on - strand, within BWI76_RS02120at 439.582 kb on - strand, within BWI76_RS02120at 439.603 kb on + strand, within BWI76_RS02120at 439.632 kb on + strand, within BWI76_RS02120at 439.803 kb on + strand, within BWI76_RS02120at 439.803 kb on + strand, within BWI76_RS02120at 439.803 kb on + strand, within BWI76_RS02120at 439.818 kb on + strand, within BWI76_RS02120at 439.828 kb on - strand, within BWI76_RS02120at 439.875 kb on + strand, within BWI76_RS02120at 439.957 kb on - strand, within BWI76_RS02120at 440.057 kb on + strand, within BWI76_RS02120at 440.094 kb on - strand, within BWI76_RS02120at 440.138 kb on + strandat 440.141 kb on - strandat 440.209 kb on - strandat 440.245 kb on + strandat 440.246 kb on - strandat 440.428 kb on - strandat 440.505 kb on - strand, within BWI76_RS02125at 440.910 kb on + strand, within BWI76_RS02125at 440.910 kb on + strand, within BWI76_RS02125at 441.021 kb on - strand, within BWI76_RS02125at 441.152 kb on - strand, within BWI76_RS02125at 441.156 kb on + strand, within BWI76_RS02125at 441.164 kb on - strand, within BWI76_RS02125at 441.251 kb on - strand, within BWI76_RS02125at 441.266 kb on + strand, within BWI76_RS02125at 441.538 kb on + strand, within BWI76_RS02125at 441.632 kb on + strand, within BWI76_RS02125at 441.641 kb on - strand, within BWI76_RS02125at 441.663 kb on + strand, within BWI76_RS02125at 441.730 kb on - strand, within BWI76_RS02125at 441.762 kb on - strand, within BWI76_RS02125at 441.824 kb on - strand, within BWI76_RS02125at 441.906 kb on + strand, within BWI76_RS02125at 441.919 kb on - strand, within BWI76_RS02125at 441.919 kb on - strand, within BWI76_RS02125at 441.919 kb on - strand, within BWI76_RS02125at 441.919 kb on - strand, within BWI76_RS02125at 442.013 kb on + strand, within BWI76_RS02125at 442.036 kb on + strand, within BWI76_RS02125at 442.094 kb on - strandat 442.212 kb on - strandat 442.249 kb on + strandat 442.257 kb on - strandat 442.257 kb on - strandat 442.310 kb on - strandat 442.376 kb on + strandat 442.384 kb on - strandat 442.547 kb on + strand, within BWI76_RS02130at 442.603 kb on - strand, within BWI76_RS02130at 442.620 kb on + strand, within BWI76_RS02130at 442.710 kb on + strand, within BWI76_RS02130at 442.718 kb on - strand, within BWI76_RS02130at 442.802 kb on + strand, within BWI76_RS02130at 442.835 kb on + strand, within BWI76_RS02130at 442.845 kb on + strand, within BWI76_RS02130at 442.845 kb on + strand, within BWI76_RS02130at 442.845 kb on + strand, within BWI76_RS02130at 442.845 kb on + strand, within BWI76_RS02130at 442.874 kb on + strand, within BWI76_RS02130at 442.910 kb on - strand, within BWI76_RS02130at 442.912 kb on + strand, within BWI76_RS02130at 442.920 kb on - strand, within BWI76_RS02130at 442.920 kb on - strand, within BWI76_RS02130at 442.995 kb on + strand, within BWI76_RS02130at 442.998 kb on - strand, within BWI76_RS02130at 443.003 kb on - strand, within BWI76_RS02130at 443.013 kb on - strand, within BWI76_RS02130at 443.057 kb on - strand, within BWI76_RS02130at 443.073 kb on + strand, within BWI76_RS02130at 443.114 kb on - strand, within BWI76_RS02130at 443.116 kb on + strand, within BWI76_RS02130at 443.119 kb on + strand, within BWI76_RS02130at 443.120 kb on - strand, within BWI76_RS02130at 443.170 kb on + strand, within BWI76_RS02130at 443.174 kb on + strand, within BWI76_RS02130at 443.182 kb on - strand, within BWI76_RS02130at 443.184 kb on + strand, within BWI76_RS02130at 443.195 kb on + strand, within BWI76_RS02130at 443.203 kb on - strand, within BWI76_RS02130at 443.219 kb on + strandat 443.219 kb on + strandat 443.227 kb on - strandat 443.227 kb on - strandat 443.229 kb on - strandat 443.231 kb on + strandat 443.236 kb on - strandat 443.239 kb on - strandat 443.240 kb on + strandat 443.240 kb on + strandat 443.248 kb on - strandat 443.255 kb on + strandat 443.267 kb on - strandat 443.273 kb on - strandat 443.273 kb on - strandat 443.273 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction RCH2_defined_glucose with MS_media 0.5x
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439,249 - BWI76_RS02120 0.32 -0.4
439,309 + BWI76_RS02120 0.36 +0.3
439,388 - BWI76_RS02120 0.41 +0.4
439,582 - BWI76_RS02120 0.54 -1.8
439,582 - BWI76_RS02120 0.54 -0.9
439,582 - BWI76_RS02120 0.54 -1.1
439,603 + BWI76_RS02120 0.56 +0.3
439,632 + BWI76_RS02120 0.58 -0.2
439,803 + BWI76_RS02120 0.69 +0.2
439,803 + BWI76_RS02120 0.69 -0.6
439,803 + BWI76_RS02120 0.69 +0.2
439,818 + BWI76_RS02120 0.70 -0.3
439,828 - BWI76_RS02120 0.71 -0.3
439,875 + BWI76_RS02120 0.74 -0.3
439,957 - BWI76_RS02120 0.80 -0.1
440,057 + BWI76_RS02120 0.87 -0.1
440,094 - BWI76_RS02120 0.89 -0.3
440,138 + +0.3
440,141 - +0.8
440,209 - -1.3
440,245 + -0.3
440,246 - -0.1
440,428 - +0.4
440,505 - BWI76_RS02125 0.13 -0.9
440,910 + BWI76_RS02125 0.32 -0.2
440,910 + BWI76_RS02125 0.32 -1.2
441,021 - BWI76_RS02125 0.38 -1.3
441,152 - BWI76_RS02125 0.44 +1.2
441,156 + BWI76_RS02125 0.44 +0.6
441,164 - BWI76_RS02125 0.45 -0.7
441,251 - BWI76_RS02125 0.49 +0.1
441,266 + BWI76_RS02125 0.50 -0.6
441,538 + BWI76_RS02125 0.63 -0.3
441,632 + BWI76_RS02125 0.68 +0.3
441,641 - BWI76_RS02125 0.68 -0.1
441,663 + BWI76_RS02125 0.69 -1.5
441,730 - BWI76_RS02125 0.73 -0.6
441,762 - BWI76_RS02125 0.74 -0.6
441,824 - BWI76_RS02125 0.77 -0.4
441,906 + BWI76_RS02125 0.81 -0.2
441,919 - BWI76_RS02125 0.82 +0.1
441,919 - BWI76_RS02125 0.82 -0.3
441,919 - BWI76_RS02125 0.82 -1.1
441,919 - BWI76_RS02125 0.82 -0.8
442,013 + BWI76_RS02125 0.86 -0.8
442,036 + BWI76_RS02125 0.88 +0.0
442,094 - -0.6
442,212 - -0.2
442,249 + -2.1
442,257 - +0.3
442,257 - -0.9
442,310 - -0.1
442,376 + -0.1
442,384 - -0.9
442,547 + BWI76_RS02130 0.25 -0.4
442,603 - BWI76_RS02130 0.30 -0.1
442,620 + BWI76_RS02130 0.32 +0.8
442,710 + BWI76_RS02130 0.41 +0.4
442,718 - BWI76_RS02130 0.42 +0.2
442,802 + BWI76_RS02130 0.50 -0.7
442,835 + BWI76_RS02130 0.53 +0.2
442,845 + BWI76_RS02130 0.54 +0.4
442,845 + BWI76_RS02130 0.54 -0.7
442,845 + BWI76_RS02130 0.54 +0.2
442,845 + BWI76_RS02130 0.54 +0.1
442,874 + BWI76_RS02130 0.57 -0.2
442,910 - BWI76_RS02130 0.60 -0.2
442,912 + BWI76_RS02130 0.60 -0.3
442,920 - BWI76_RS02130 0.61 -1.1
442,920 - BWI76_RS02130 0.61 +1.1
442,995 + BWI76_RS02130 0.68 -1.0
442,998 - BWI76_RS02130 0.69 -0.0
443,003 - BWI76_RS02130 0.69 -0.3
443,013 - BWI76_RS02130 0.70 -0.5
443,057 - BWI76_RS02130 0.74 -0.4
443,073 + BWI76_RS02130 0.76 -0.5
443,114 - BWI76_RS02130 0.80 +0.2
443,116 + BWI76_RS02130 0.80 +0.0
443,119 + BWI76_RS02130 0.80 -0.0
443,120 - BWI76_RS02130 0.81 -0.1
443,170 + BWI76_RS02130 0.85 +0.2
443,174 + BWI76_RS02130 0.86 -1.4
443,182 - BWI76_RS02130 0.87 -1.0
443,184 + BWI76_RS02130 0.87 +0.1
443,195 + BWI76_RS02130 0.88 -0.8
443,203 - BWI76_RS02130 0.89 -0.3
443,219 + +0.2
443,219 + -0.4
443,227 - -0.6
443,227 - -1.0
443,229 - -0.3
443,231 + +0.5
443,236 - -0.2
443,239 - -0.3
443,240 + -1.9
443,240 + -0.4
443,248 - -0.1
443,255 + -0.2
443,267 - -0.7
443,273 - -0.5
443,273 - -0.9
443,273 - +0.9

Or see this region's nucleotide sequence