Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2358

Experiment: BG11 with Chloride 0.48828125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Chloride 0.48828125 mM
2,423,531	+		Synpcc7942_2357	0.37	+0.0
2,423,531	+		Synpcc7942_2357	0.37	-3.1
2,423,531	+		Synpcc7942_2357	0.37	-1.0
2,423,531	+		Synpcc7942_2357	0.37	+0.6
2,423,539	-		Synpcc7942_2357	0.37	-1.5
2,423,539	-		Synpcc7942_2357	0.37	-0.7
2,423,544	-		Synpcc7942_2357	0.38	-1.8
2,423,544	-		Synpcc7942_2357	0.38	-0.5
2,423,544	-		Synpcc7942_2357	0.38	-0.8
2,423,574	+		Synpcc7942_2357	0.40	+0.5
2,423,576	-		Synpcc7942_2357	0.40	-0.5
2,423,582	-		Synpcc7942_2357	0.40	+0.1
2,423,582	-		Synpcc7942_2357	0.40	-1.1
2,423,590	+		Synpcc7942_2357	0.41	-2.0
2,423,605	+		Synpcc7942_2357	0.42	+0.0
2,423,613	-		Synpcc7942_2357	0.42	-1.1
2,423,613	-		Synpcc7942_2357	0.42	+0.4
2,423,626	+		Synpcc7942_2357	0.43	-0.3
2,423,686	-		Synpcc7942_2357	0.47	+0.7
2,423,689	-		Synpcc7942_2357	0.48	+0.5
2,423,700	+		Synpcc7942_2357	0.48	+0.1
2,423,711	-		Synpcc7942_2357	0.49	-1.4
2,423,727	+		Synpcc7942_2357	0.50	-0.6
2,423,735	-		Synpcc7942_2357	0.51	+1.2
2,423,755	-		Synpcc7942_2357	0.52	+2.3
2,423,757	+		Synpcc7942_2357	0.52	-1.0
2,423,757	-		Synpcc7942_2357	0.52	+0.2
2,423,773	+				+0.5
2,423,773	+		Synpcc7942_2357	0.53	-1.2
2,423,773	+		Synpcc7942_2357	0.53	-1.5
2,423,781	-		Synpcc7942_2357	0.54	+0.2
2,423,781	-		Synpcc7942_2357	0.54	-0.7
2,423,782	-		Synpcc7942_2357	0.54	-1.1
2,423,788	+		Synpcc7942_2357	0.54	-0.4
2,423,796	-		Synpcc7942_2357	0.55	-2.0
2,423,803	-		Synpcc7942_2357	0.55	+0.2
2,423,811	-		Synpcc7942_2357	0.56	-0.3
2,423,816	+		Synpcc7942_2357	0.56	-0.0
2,423,854	-		Synpcc7942_2357	0.59	+0.0
2,423,876	+		Synpcc7942_2357	0.61	-1.4
2,423,884	+		Synpcc7942_2357	0.61	-0.6
2,423,913	+		Synpcc7942_2357	0.63	+1.1
2,423,913	+		Synpcc7942_2357	0.63	-0.5
2,423,917	-		Synpcc7942_2357	0.63	+0.9
2,423,918	+		Synpcc7942_2357	0.63	-0.3
2,423,936	-		Synpcc7942_2357	0.65	+1.6
2,424,018	+		Synpcc7942_2357	0.70	-0.7
2,424,026	-		Synpcc7942_2357	0.71	-0.5
2,424,038	-		Synpcc7942_2357	0.72	-1.2
2,424,084	-		Synpcc7942_2357	0.75	-1.9
2,424,118	-		Synpcc7942_2357	0.77	-2.0
2,424,118	-		Synpcc7942_2357	0.77	-1.6
2,424,131	+		Synpcc7942_2357	0.78	-2.5
2,424,136	+		Synpcc7942_2357	0.78	-1.2
2,424,138	+		Synpcc7942_2357	0.79	+1.5
2,424,138	+		Synpcc7942_2357	0.79	+0.2
2,424,138	+		Synpcc7942_2357	0.79	+0.6
2,424,138	+		Synpcc7942_2357	0.79	+0.2
2,424,139	-				-0.1
2,424,141	+		Synpcc7942_2357	0.79	-3.3
2,424,146	-		Synpcc7942_2357	0.79	+1.5
2,424,148	-		Synpcc7942_2357	0.79	+0.4
2,424,149	-		Synpcc7942_2357	0.79	-0.4
2,424,158	-		Synpcc7942_2357	0.80	-0.5
2,424,177	+		Synpcc7942_2357	0.81	+2.2
2,424,221	+		Synpcc7942_2357	0.84	-0.4
2,424,264	-		Synpcc7942_2357	0.87	-1.6
2,424,292	+		Synpcc7942_2357	0.89	-2.1
2,424,300	-		Synpcc7942_2357	0.90	+0.0
2,424,315	+				-0.1
2,424,315	+				+1.2
2,424,323	-				-1.1
2,424,323	-				-0.3
2,424,332	-				-0.1
2,424,333	-				-0.3
2,424,333	-				-1.0
2,424,356	+				-1.8
2,424,356	+				+0.4
2,424,371	-				-0.0
2,424,374	-				-0.7
2,424,406	-				+0.2
2,424,424	+				+0.3
2,424,424	+				+0.0
2,424,430	+				+0.3
2,424,438	-				-0.3
2,424,438	-				-0.9
2,424,444	-				-1.3
2,424,444	-				-0.5
2,424,473	-				+0.1
2,424,482	+				+1.0
2,424,483	-				-1.9
2,424,483	-				-1.8
2,424,527	-				-0.5
2,424,535	-				-2.3
2,424,544	-				-2.2
2,424,549	-				+0.0
2,424,557	-				+0.9
2,424,615	-				+0.9
2,424,625	+		Synpcc7942_2358	0.12	-2.4
2,424,625	+		Synpcc7942_2358	0.12	-1.1
2,424,633	-		Synpcc7942_2358	0.13	+1.5
2,424,694	+		Synpcc7942_2358	0.21	-2.5
2,424,722	-		Synpcc7942_2358	0.24	-1.1
2,424,769	-		Synpcc7942_2358	0.30	-1.7
2,424,813	-		Synpcc7942_2358	0.35	-2.8
2,424,841	+		Synpcc7942_2358	0.38	-3.8
2,424,841	+		Synpcc7942_2358	0.38	+0.5
2,424,841	+		Synpcc7942_2358	0.38	-0.5
2,424,841	+		Synpcc7942_2358	0.38	-1.2
2,424,841	+		Synpcc7942_2358	0.38	-2.3
2,424,842	-		Synpcc7942_2358	0.39	+0.6
2,424,842	-		Synpcc7942_2358	0.39	-2.7
2,424,849	-		Synpcc7942_2358	0.39	+1.5
2,424,849	-		Synpcc7942_2358	0.39	-0.1
2,424,849	-		Synpcc7942_2358	0.39	-5.1
2,424,859	-		Synpcc7942_2358	0.41	-2.9
2,424,859	-		Synpcc7942_2358	0.41	-1.3
2,424,862	-		Synpcc7942_2358	0.41	-1.4
2,424,869	-		Synpcc7942_2358	0.42	-2.5
2,424,888	+		Synpcc7942_2358	0.44	-3.9
2,424,910	+		Synpcc7942_2358	0.47	-1.9
2,424,935	+		Synpcc7942_2358	0.50	-1.6
2,424,935	-		Synpcc7942_2358	0.50	-0.6
2,424,953	-		Synpcc7942_2358	0.52	-1.1
2,425,071	+		Synpcc7942_2358	0.66	-1.2
2,425,071	+		Synpcc7942_2358	0.66	-1.1
2,425,079	-				+0.5
2,425,094	-		Synpcc7942_2358	0.69	-1.5
2,425,098	+		Synpcc7942_2358	0.69	-0.3
2,425,106	-		Synpcc7942_2358	0.70	-1.3
2,425,112	-		Synpcc7942_2358	0.71	-3.4
2,425,131	+		Synpcc7942_2358	0.73	-1.1
2,425,131	+		Synpcc7942_2358	0.73	-1.3
2,425,131	+		Synpcc7942_2358	0.73	-0.5
2,425,148	+		Synpcc7942_2358	0.75	-1.0
2,425,190	-		Synpcc7942_2358	0.80	-1.2
2,425,201	-		Synpcc7942_2358	0.82	-1.2
2,425,221	+		Synpcc7942_2358	0.84	-1.5
2,425,229	-		Synpcc7942_2358	0.85	-1.0
2,425,232	+		Synpcc7942_2358	0.85	-1.8
2,425,234	-		Synpcc7942_2358	0.86	-2.5
2,425,243	+		Synpcc7942_2358	0.87	-2.3
2,425,299	+				-0.8
2,425,307	-				-4.9
2,425,309	+				-0.8
2,425,311	+				-0.9
2,425,311	+				-2.7
2,425,317	-				-0.1
2,425,317	-				+1.4
2,425,317	-				-3.1
2,425,317	-				-1.4
2,425,317	-				-3.2
2,425,317	-				-0.1
2,425,319	-				+2.5
2,425,319	-				-1.2
2,425,319	-				-0.9
2,425,319	-				-2.0
2,425,319	-				-0.4
2,425,366	-				-0.8
2,425,384	-				+0.8
2,425,384	-				-1.8
2,425,384	-				-1.0
2,425,385	-				-0.4