Strain Fitness in Ralstonia solanacearum IBSBF1503 around RALBFv3_RS23970

Experiment: Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
2,661,022	+		RALBFv3_RS12060	0.79	-0.4
2,661,022	+		RALBFv3_RS12060	0.79	-0.8
2,661,022	+		RALBFv3_RS12060	0.79	-0.3
2,661,023	-		RALBFv3_RS12060	0.80	+0.3
2,661,023	-		RALBFv3_RS12060	0.80	+0.1
2,661,023	-		RALBFv3_RS12060	0.80	-1.5
2,661,023	-		RALBFv3_RS12060	0.80	+0.8
2,661,023	-		RALBFv3_RS12060	0.80	-0.3
2,661,030	+		RALBFv3_RS12060	0.80	+0.2
2,661,030	+		RALBFv3_RS12060	0.80	-0.4
2,661,030	+		RALBFv3_RS12060	0.80	+0.9
2,661,030	+		RALBFv3_RS12060	0.80	+0.6
2,661,030	+		RALBFv3_RS12060	0.80	+1.0
2,661,030	+		RALBFv3_RS12060	0.80	-0.7
2,661,030	+		RALBFv3_RS12060	0.80	+5.0
2,661,031	-		RALBFv3_RS12060	0.80	-1.5
2,661,031	-		RALBFv3_RS12060	0.80	-1.3
2,661,031	-		RALBFv3_RS12060	0.80	-0.8
2,661,031	-		RALBFv3_RS12060	0.80	-1.2
2,661,031	-		RALBFv3_RS12060	0.80	-0.3
2,661,031	-		RALBFv3_RS12060	0.80	-0.6
2,661,031	-		RALBFv3_RS12060	0.80	+0.1
2,661,064	+		RALBFv3_RS12060	0.82	-0.4
2,661,064	+		RALBFv3_RS12060	0.82	-1.0
2,661,065	-		RALBFv3_RS12060	0.82	-0.0
2,661,065	-		RALBFv3_RS12060	0.82	+1.5
2,661,070	+		RALBFv3_RS12060	0.82	-1.0
2,661,071	-		RALBFv3_RS12060	0.83	-1.7
2,661,071	-		RALBFv3_RS12060	0.83	+1.3
2,661,071	-		RALBFv3_RS12060	0.83	+2.4
2,661,209	+				+0.3
2,661,209	+				-0.3
2,661,209	+				+0.5
2,661,209	+				-1.2
2,661,210	-				+0.7
2,661,251	+				-0.1
2,661,251	+				-0.2
2,661,251	+				+0.6
2,661,251	+				-1.3
2,661,251	+				-1.6
2,661,252	-				-0.2
2,661,252	-				-2.2
2,661,252	-				-1.1
2,661,252	-				+0.4
2,661,252	-				-0.2
2,661,252	-				+0.5
2,661,272	+				+0.8
2,661,272	+				-1.9
2,661,272	+				+0.6
2,661,273	-				-2.2
2,661,273	-				-1.9
2,661,273	-				+0.4
2,661,273	-				-1.6
2,661,276	+				-0.0
2,661,276	+				-0.4
2,661,277	-				-0.6
2,661,277	-				+3.3
2,661,357	+				+1.9
2,661,358	-				+0.5
2,661,381	+				-0.6
2,661,382	-				-1.1
2,661,382	-				+0.6
2,661,398	+				-1.9
2,661,399	-				-0.2
2,661,399	-				-0.7
2,661,401	+				+0.2
2,661,401	+				+0.1
2,661,402	-				-2.3
2,661,402	-				+0.2
2,661,402	-				-0.8
2,661,402	-				-0.7
2,661,463	+				+0.7
2,661,466	+				-0.7
2,661,466	+				-0.1
2,661,467	-				+0.4
2,661,467	-				-1.8
2,661,467	-				-0.4
2,661,467	-				+0.5
2,661,467	-				+1.8
2,661,482	+				+0.6
2,661,482	+				-0.4
2,661,482	+				+1.6
2,661,482	+				+0.7
2,661,483	-				-1.0
2,661,517	+				+0.9
2,661,517	+				+2.8
2,661,528	+				+1.5
2,661,528	+				-0.2
2,661,528	+				-0.7
2,661,528	+				+0.1
2,661,529	-				+0.8
2,661,531	+				-0.9
2,661,531	+				-0.6
2,661,531	+				-0.3
2,661,531	+				-1.3
2,661,531	+				-0.6
2,661,531	+				+1.4
2,661,531	+				+0.1
2,661,531	+				+1.9
2,661,531	+				+0.5
2,661,531	+				+1.3
2,661,532	-				+0.9
2,661,532	-				-0.9
2,661,532	-				-0.2
2,661,532	-				-0.9
2,661,532	-				+3.8
2,661,532	-				-0.7
2,661,569	+				+0.3
2,661,570	-				+0.8
2,661,631	+				+0.4
2,661,632	-				-1.7
2,661,632	-				-1.4
2,661,671	+				-1.7
2,661,671	+				-0.6
2,661,671	+				-1.4
2,661,672	-				-0.2
2,661,702	+				-1.4
2,661,702	+				-0.6
2,661,702	+				-1.0
2,661,702	+				-0.4
2,661,702	+				-0.3
2,661,702	+				-0.5
2,661,702	+				-1.6
2,661,703	-				-1.0
2,661,704	+				-1.7
2,661,704	+				+1.0
2,661,704	+				-0.8
2,661,705	-				-1.5
2,661,705	-				-0.7
2,661,705	-				-0.3
2,661,705	-				-0.5
2,661,705	-				+0.5
2,661,725	+				-0.9
2,661,725	+				-0.2
2,661,726	-				-1.0
2,661,726	-				-0.2
2,661,728	+				-0.0
2,661,728	+				-0.4
2,661,728	+				-1.7
2,661,728	+				-0.1
2,661,728	+				-0.4
2,661,729	-				+0.0
2,661,749	+				-2.8
2,661,749	+				-0.1
2,661,749	+				-2.9
2,661,749	+				+2.2
2,661,750	-				+0.1
2,661,750	-				-1.0
2,661,753	+				-0.6
2,661,753	+				+1.4
2,661,753	+				+0.1
2,661,753	+				-0.2
2,661,753	+				+0.1
2,661,753	+				+0.7
2,661,754	-				+0.4
2,661,754	-				+1.1
2,661,754	-				-0.3
2,661,780	+				-0.2
2,661,780	+				-0.5
2,661,781	-				+1.5
2,661,781	-				-0.5
2,661,783	+				+0.7
2,661,783	+				+2.9
2,661,783	+				-0.8
2,661,783	+				-0.6
2,661,783	+				-2.1
2,661,784	-				+0.8
2,661,877	+				+0.3
2,661,878	-				-0.3
2,661,878	-				-0.1
2,661,878	-				-0.5
2,661,896	+				+3.3
2,661,896	+				+0.7
2,661,896	+				+3.8
2,661,896	+				-0.2
2,661,896	+				-0.9
2,661,896	+				+0.9
2,661,896	+				+1.9
2,661,896	+				-0.6
2,661,896	+				-0.5
2,661,896	+				-0.5
2,661,896	+				-2.3
2,661,896	+				-0.4
2,661,897	-				-0.7
2,661,897	-				-0.6
2,661,897	-				+0.2
2,661,897	-				-1.3
2,661,897	-				-1.5
2,661,897	-				+1.6
2,661,897	-				+0.5
2,661,897	-				+0.5
2,661,900	+				-0.3
2,661,900	+				-0.9
2,661,900	+				+1.4
2,661,900	+				+1.4
2,661,900	+				-0.2
2,661,900	+				-0.2
2,661,900	+				+0.8
2,661,900	+				-0.8
2,661,901	-				-1.9
2,661,901	-				-0.2
2,661,901	-				+0.1
2,661,901	-				+0.5
2,661,901	-				+1.8
2,661,901	-				+2.8
2,661,901	-				-0.4
2,661,957	+				-1.4
2,661,957	+				-0.0
2,661,958	-				-0.5
2,661,966	+				-2.2
2,661,966	+				+1.4
2,661,967	-				-0.7
2,661,967	-				-0.8
2,661,967	-				-0.4
2,661,967	-				+1.3
2,663,172	-				-1.2
2,663,172	-				-1.8
2,663,172	-				-0.1
2,663,206	-				-1.2
2,663,206	-				-1.2
2,663,249	+				+0.8
2,663,249	+				+1.0
2,663,249	+				-1.1
2,663,249	+				+2.8
2,663,249	+				+0.2
2,663,249	+				+2.0
2,663,249	+				-0.5
2,663,249	+				-0.1
2,663,249	+				-0.4
2,663,250	-				+0.4
2,663,250	-				-0.4
2,663,250	-				-1.7
2,663,250	-				-0.4
2,663,250	-				+0.3
2,663,250	-				-0.8
2,663,250	-				-0.3
2,663,306	+				-1.1
2,663,306	+				+0.1
2,663,306	+				+1.0
2,663,306	+				+1.9
2,663,306	+				-0.5
2,663,307	-				-0.7
2,663,323	+				-0.5
2,663,324	-				-0.2
2,663,324	-				-0.2
2,663,324	-				-0.1
2,663,533	+		RALBFv3_RS12065	0.35	-0.9
2,663,534	-		RALBFv3_RS12065	0.35	-0.0
2,663,534	-		RALBFv3_RS12065	0.35	-0.5
2,663,534	-		RALBFv3_RS12065	0.35	+0.1
2,663,534	-		RALBFv3_RS12065	0.35	-0.7
2,663,534	-		RALBFv3_RS12065	0.35	+0.1
2,663,580	+		RALBFv3_RS12065	0.44	-0.9
2,663,580	+		RALBFv3_RS12065	0.44	+2.8
2,663,580	+		RALBFv3_RS12065	0.44	-1.1
2,663,580	+		RALBFv3_RS12065	0.44	+0.8
2,663,580	+		RALBFv3_RS12065	0.44	+0.8
2,663,580	+		RALBFv3_RS12065	0.44	-0.2
2,663,581	-		RALBFv3_RS12065	0.44	+1.4
2,663,581	-		RALBFv3_RS12065	0.44	+0.0
2,663,581	-		RALBFv3_RS12065	0.44	+0.1
2,663,581	-		RALBFv3_RS12065	0.44	+1.1
2,663,581	-		RALBFv3_RS12065	0.44	-0.2
2,663,622	+		RALBFv3_RS12065	0.52	+1.4
2,663,622	+		RALBFv3_RS12065	0.52	-1.0
2,663,622	+		RALBFv3_RS12065	0.52	-2.3
2,663,622	+		RALBFv3_RS12065	0.52	+0.1
2,663,622	+		RALBFv3_RS12065	0.52	+1.9
2,663,622	+		RALBFv3_RS12065	0.52	-0.6
2,663,623	-		RALBFv3_RS12065	0.52	+0.2
2,663,623	-		RALBFv3_RS12065	0.52	+1.8
2,663,623	-		RALBFv3_RS12065	0.52	-0.7
2,663,623	-		RALBFv3_RS12065	0.52	-1.1
2,663,645	+		RALBFv3_RS12065	0.57	-1.9
2,663,645	+		RALBFv3_RS12065	0.57	-0.1
2,663,646	-		RALBFv3_RS12065	0.57	-0.9
2,663,730	-		RALBFv3_RS12065	0.73	+0.9
2,663,783	+		RALBFv3_RS12065	0.84	-3.0
2,663,783	+		RALBFv3_RS12065	0.84	-0.2
2,663,783	+		RALBFv3_RS12065	0.84	-0.0
2,663,783	+		RALBFv3_RS12065	0.84	+0.7
2,663,783	+		RALBFv3_RS12065	0.84	+2.8
2,663,783	+		RALBFv3_RS12065	0.84	-0.7
2,663,783	+		RALBFv3_RS12065	0.84	+1.2
2,663,783	+		RALBFv3_RS12065	0.84	+6.8
2,663,783	+		RALBFv3_RS12065	0.84	+1.4
2,663,783	+		RALBFv3_RS12065	0.84	+0.9
2,663,783	+		RALBFv3_RS12065	0.84	-0.3
2,663,783	+		RALBFv3_RS12065	0.84	+1.9
2,663,784	-		RALBFv3_RS12065	0.84	-1.3
2,663,784	-		RALBFv3_RS12065	0.84	-0.6
2,663,836	-				-1.3
2,663,843	+				+2.8
2,663,844	-				-1.1
2,663,844	-				-0.6
2,663,904	+				+2.2
2,663,904	+				-0.6
2,663,910	-				-0.3
2,663,980	+				+2.3
2,663,981	-				+1.6
2,663,981	-				+0.4
2,663,981	-				+0.2
2,664,018	-				-1.1
2,664,019	-				-1.0
2,664,019	-				+0.1
2,664,019	-				-0.0
2,664,020	+				+0.1
2,664,020	+				-1.4
2,664,021	-				-1.8
2,664,021	-				-1.2
2,664,034	-				+2.4
2,664,049	+				+2.8
2,664,102	-				-0.8
2,664,106	+				-0.2
2,664,106	+				-0.8
2,664,106	+				+0.0
2,664,106	+				+0.1
2,664,106	+				-1.3
2,664,107	-				-0.5
2,664,115	+				+0.3
2,664,115	+				-0.2
2,664,115	+				-0.5
2,664,115	+				-0.0
2,664,115	+				+0.7
2,664,115	+				-0.9
2,664,116	-				+2.2
2,664,116	-				+0.8
2,664,116	-				-0.2
2,664,116	-				-0.6
2,664,116	-				+1.2
2,664,118	+				+0.4
2,664,119	-				-2.8
2,664,119	-				+0.3
2,664,119	-				-0.8
2,664,167	+		RALBFv3_RS12070	0.21	-0.5
2,664,167	+		RALBFv3_RS12070	0.21	+0.8
2,664,167	+		RALBFv3_RS12070	0.21	+0.4