Strain Fitness in Ralstonia solanacearum IBSBF1503 around RALBFv3_RS22615

Experiment: Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
1,833,854	+		RALBFv3_RS22605	0.64	+2.5
1,833,854	+		RALBFv3_RS22605	0.64	-1.1
1,833,854	+		RALBFv3_RS22605	0.64	-1.0
1,833,854	+		RALBFv3_RS22605	0.64	-3.6
1,833,854	+		RALBFv3_RS22605	0.64	+0.3
1,833,854	+		RALBFv3_RS22605	0.64	-0.7
1,833,854	+		RALBFv3_RS22605	0.64	-1.4
1,833,855	-		RALBFv3_RS22605	0.64	+1.0
1,833,855	-		RALBFv3_RS22605	0.64	+0.2
1,833,857	-		RALBFv3_RS22605	0.64	+0.2
1,833,906	-		RALBFv3_RS22605	0.69	+1.1
1,834,410	+		RALBFv3_RS22610	0.27	+1.2
1,834,410	-		RALBFv3_RS22610	0.27	-0.8
1,834,411	-		RALBFv3_RS22610	0.27	-2.2
1,834,411	-		RALBFv3_RS22610	0.27	+0.4
1,834,411	-		RALBFv3_RS22610	0.27	-0.2
1,834,411	-		RALBFv3_RS22610	0.27	-1.7
1,834,411	-		RALBFv3_RS22610	0.27	-3.1
1,834,411	-		RALBFv3_RS22610	0.27	-1.2
1,834,411	-		RALBFv3_RS22610	0.27	-0.9
1,834,411	-		RALBFv3_RS22610	0.27	-1.6
1,834,674	+		RALBFv3_RS22610	0.69	-0.5
1,834,729	-		RALBFv3_RS22610	0.78	-0.6
1,835,003	-				-0.3
1,835,003	-				+0.2
1,835,149	+				-0.5
1,835,171	-				-0.5
1,835,686	+				-0.2
1,835,765	-		RALBFv3_RS22615	0.11	+0.2
1,836,020	-		RALBFv3_RS22615	0.13	+0.4
1,836,217	+		RALBFv3_RS22615	0.16	+2.5
1,836,218	-		RALBFv3_RS22615	0.16	-0.2
1,836,269	-		RALBFv3_RS22615	0.16	-0.8
1,836,293	-		RALBFv3_RS22615	0.17	+1.9
1,836,293	-		RALBFv3_RS22615	0.17	-0.5
1,836,687	+		RALBFv3_RS22615	0.21	+0.9
1,836,688	-		RALBFv3_RS22615	0.21	+0.2
1,836,757	+		RALBFv3_RS22615	0.22	-1.6
1,836,757	+		RALBFv3_RS22615	0.22	+0.7
1,836,757	+		RALBFv3_RS22615	0.22	-0.1
1,836,757	+		RALBFv3_RS22615	0.22	-0.9
1,836,758	-		RALBFv3_RS22615	0.22	-0.1
1,836,758	-		RALBFv3_RS22615	0.22	+0.2
1,836,886	+		RALBFv3_RS22615	0.23	-1.5
1,836,887	-		RALBFv3_RS22615	0.23	-2.1
1,836,887	-		RALBFv3_RS22615	0.23	-1.5
1,836,984	-		RALBFv3_RS22615	0.25	+1.4
1,837,202	-		RALBFv3_RS22615	0.27	-1.0
1,837,210	+		RALBFv3_RS22615	0.27	-0.9
1,837,210	+		RALBFv3_RS22615	0.27	-0.1
1,837,211	-		RALBFv3_RS22615	0.27	-0.3
1,837,282	+		RALBFv3_RS22615	0.28	-1.2
1,837,664	-		RALBFv3_RS22615	0.32	-0.9
1,837,718	+		RALBFv3_RS22615	0.33	+0.4
1,838,175	+		RALBFv3_RS22615	0.38	+0.5
1,838,175	+		RALBFv3_RS22615	0.38	-0.0
1,838,175	+		RALBFv3_RS22615	0.38	-0.9
1,838,175	+		RALBFv3_RS22615	0.38	+0.3
1,838,176	-		RALBFv3_RS22615	0.38	-0.1
1,838,179	+		RALBFv3_RS22615	0.38	+0.7
1,838,180	-		RALBFv3_RS22615	0.38	-1.9
1,838,180	-		RALBFv3_RS22615	0.38	+0.1
1,838,180	-		RALBFv3_RS22615	0.38	+1.3
1,838,326	+		RALBFv3_RS22615	0.40	+0.0
1,838,536	+		RALBFv3_RS22615	0.42	-0.4
1,838,545	+		RALBFv3_RS22615	0.43	+2.9
1,838,545	+		RALBFv3_RS22615	0.43	+0.7
1,838,545	+		RALBFv3_RS22615	0.43	+0.2
1,838,545	+		RALBFv3_RS22615	0.43	-0.1
1,838,546	-		RALBFv3_RS22615	0.43	-1.9
1,838,689	+		RALBFv3_RS22615	0.44	-0.2
1,838,690	-		RALBFv3_RS22615	0.44	-0.4
1,838,690	-		RALBFv3_RS22615	0.44	+0.6
1,838,690	-		RALBFv3_RS22615	0.44	+1.6
1,838,980	+		RALBFv3_RS22615	0.48	-2.6
1,838,980	+		RALBFv3_RS22615	0.48	-1.2
1,838,980	+		RALBFv3_RS22615	0.48	-1.4
1,838,981	-		RALBFv3_RS22615	0.48	+1.0
1,838,981	-		RALBFv3_RS22615	0.48	-0.6
1,838,981	-		RALBFv3_RS22615	0.48	+2.5
1,839,221	-		RALBFv3_RS22615	0.50	-0.1
1,839,470	-		RALBFv3_RS22615	0.53	-0.4
1,839,494	-		RALBFv3_RS22615	0.53	-0.5
1,839,952	+		RALBFv3_RS22615	0.59	-1.3
1,839,952	+		RALBFv3_RS22615	0.59	-0.3
1,839,953	-		RALBFv3_RS22615	0.59	-0.6
1,839,953	-		RALBFv3_RS22615	0.59	+1.0
1,839,953	-		RALBFv3_RS22615	0.59	-2.0
1,840,051	-		RALBFv3_RS22615	0.60	-0.8
1,840,195	+		RALBFv3_RS22615	0.61	+1.3
1,840,195	+		RALBFv3_RS22615	0.61	-1.0
1,840,342	+		RALBFv3_RS22615	0.63	-0.3
1,840,396	+		RALBFv3_RS22615	0.64	+0.4
1,840,396	+		RALBFv3_RS22615	0.64	-0.7
1,840,405	+		RALBFv3_RS22615	0.64	-0.7
1,840,405	+		RALBFv3_RS22615	0.64	+0.5
1,840,405	+		RALBFv3_RS22615	0.64	+0.2
1,840,406	-		RALBFv3_RS22615	0.64	+0.9
1,840,406	-		RALBFv3_RS22615	0.64	+0.8
1,840,858	+				-0.6
1,840,858	+		RALBFv3_RS22615	0.69	-0.2
1,840,859	-		RALBFv3_RS22615	0.69	-1.3
1,841,114	-		RALBFv3_RS22615	0.72	+0.7
1,841,174	+		RALBFv3_RS22615	0.73	-0.4
1,841,233	-		RALBFv3_RS22615	0.73	-0.5
1,841,375	-		RALBFv3_RS22615	0.75	-0.1
1,841,521	+		RALBFv3_RS22615	0.77	-0.3
1,841,522	-		RALBFv3_RS22615	0.77	-0.9
1,841,522	-		RALBFv3_RS22615	0.77	+0.2
1,841,543	-		RALBFv3_RS22615	0.77	-1.7
1,841,543	-		RALBFv3_RS22615	0.77	-0.6
1,841,543	-		RALBFv3_RS22615	0.77	-1.1
1,841,543	-		RALBFv3_RS22615	0.77	-1.0
1,841,572	+		RALBFv3_RS22615	0.77	-1.2
1,841,573	-		RALBFv3_RS22615	0.77	+0.4
1,842,149	+		RALBFv3_RS22615	0.84	-0.5
1,842,188	-		RALBFv3_RS22615	0.84	-0.1
1,842,188	-		RALBFv3_RS22615	0.84	-0.1
1,842,442	+		RALBFv3_RS22615	0.87	-0.7
1,842,691	+				-0.7
1,842,692	-				+0.5
1,842,692	-				-0.1
1,842,716	-				-0.3
1,842,716	-				+2.3
1,843,179	-				+0.1
1,843,250	+				+1.9
1,843,250	+				-0.3
1,843,250	+				-0.4
1,843,250	+				+0.9
1,843,251	-				+0.6
1,843,251	-				-1.4
1,843,251	-				-2.1
1,843,252	+				-1.8
1,843,563	+		RALBFv3_RS22620	0.32	+0.4
1,844,021	-		RALBFv3_RS22625	0.75	+1.0
1,844,021	-		RALBFv3_RS22625	0.75	-1.2
1,844,207	+				-0.2
1,844,208	-				-0.6
1,844,416	-		RALBFv3_RS22630	0.22	+0.1
1,844,528	-		RALBFv3_RS22630	0.29	-1.6