Experiment: RCH2_defined_glucose with MS_media 0.5x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17785 and BWI76_RS17790 are separated by 3 nucleotides BWI76_RS17790 and BWI76_RS17795 are separated by 68 nucleotides BWI76_RS17795 and BWI76_RS17800 are separated by 69 nucleotides
BWI76_RS17785: BWI76_RS17785 - septum site-determining protein MinD, at 3,696,778 to 3,697,590
_RS17785
BWI76_RS17790: BWI76_RS17790 - cell division topological specificity factor, at 3,697,594 to 3,697,863
_RS17790
BWI76_RS17795: BWI76_RS17795 - ribonuclease D, at 3,697,932 to 3,699,059
_RS17795
BWI76_RS17800: BWI76_RS17800 - long-chain-fatty-acid--CoA ligase, at 3,699,129 to 3,700,847
_RS17800
Position (kb)
3697
3698
3699
3700 Strain fitness (log2 ratio)
-1
0
1 at 3697.023 kb on + strand, within BWI76_RS17785 at 3697.078 kb on + strand, within BWI76_RS17785 at 3697.086 kb on - strand, within BWI76_RS17785 at 3697.210 kb on - strand, within BWI76_RS17785 at 3697.436 kb on + strand, within BWI76_RS17785 at 3697.436 kb on + strand, within BWI76_RS17785 at 3697.436 kb on + strand, within BWI76_RS17785 at 3697.444 kb on - strand, within BWI76_RS17785 at 3697.925 kb on + strand at 3698.089 kb on - strand, within BWI76_RS17795 at 3698.670 kb on - strand, within BWI76_RS17795 at 3698.717 kb on - strand, within BWI76_RS17795 at 3698.939 kb on + strand, within BWI76_RS17795 at 3699.781 kb on - strand, within BWI76_RS17800 at 3699.888 kb on - strand, within BWI76_RS17800 at 3699.940 kb on - strand, within BWI76_RS17800
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with MS_media 0.5x remove 3,697,023 + BWI76_RS17785 0.30 -0.3 3,697,078 + BWI76_RS17785 0.37 +0.5 3,697,086 - BWI76_RS17785 0.38 -0.8 3,697,210 - BWI76_RS17785 0.53 -0.2 3,697,436 + BWI76_RS17785 0.81 -0.4 3,697,436 + BWI76_RS17785 0.81 -0.2 3,697,436 + BWI76_RS17785 0.81 -0.5 3,697,444 - BWI76_RS17785 0.82 -0.7 3,697,925 + +0.3 3,698,089 - BWI76_RS17795 0.14 +1.0 3,698,670 - BWI76_RS17795 0.65 -0.1 3,698,717 - BWI76_RS17795 0.70 +0.5 3,698,939 + BWI76_RS17795 0.89 -0.1 3,699,781 - BWI76_RS17800 0.38 +0.0 3,699,888 - BWI76_RS17800 0.44 +0.6 3,699,940 - BWI76_RS17800 0.47 +0.1
Or see this region's nucleotide sequence