Experiment: RCH2_defined_glucose with MS_media 0.5x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15640 and BWI76_RS15645 are separated by 3 nucleotides BWI76_RS15645 and BWI76_RS15650 overlap by 41 nucleotides BWI76_RS15650 and BWI76_RS15655 are separated by 14 nucleotides
BWI76_RS15640: BWI76_RS15640 - hypothetical protein, at 3,268,333 to 3,269,598
_RS15640
BWI76_RS15645: BWI76_RS15645 - gp6, at 3,269,602 to 3,270,528
_RS15645
BWI76_RS15650: BWI76_RS15650 - gp5, at 3,270,488 to 3,271,837
_RS15650
BWI76_RS15655: BWI76_RS15655 - hypothetical protein, at 3,271,852 to 3,273,330
_RS15655
Position (kb)
3270
3271
3272 Strain fitness (log2 ratio)
-2
-1
0
1 at 3269.615 kb on - strand at 3269.616 kb on + strand at 3269.822 kb on + strand, within BWI76_RS15645 at 3269.978 kb on + strand, within BWI76_RS15645 at 3270.003 kb on + strand, within BWI76_RS15645 at 3270.065 kb on - strand, within BWI76_RS15645 at 3270.128 kb on - strand, within BWI76_RS15645 at 3270.207 kb on + strand, within BWI76_RS15645 at 3270.207 kb on + strand, within BWI76_RS15645 at 3270.454 kb on - strand at 3270.507 kb on + strand at 3270.612 kb on + strand at 3270.771 kb on - strand, within BWI76_RS15650 at 3271.112 kb on + strand, within BWI76_RS15650 at 3271.293 kb on + strand, within BWI76_RS15650 at 3271.323 kb on - strand, within BWI76_RS15650 at 3271.383 kb on - strand, within BWI76_RS15650 at 3272.277 kb on + strand, within BWI76_RS15655 at 3272.345 kb on - strand, within BWI76_RS15655 at 3272.599 kb on - strand, within BWI76_RS15655 at 3272.599 kb on - strand, within BWI76_RS15655 at 3272.633 kb on - strand, within BWI76_RS15655
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with MS_media 0.5x remove 3,269,615 - -0.3 3,269,616 + +0.1 3,269,822 + BWI76_RS15645 0.24 -0.1 3,269,978 + BWI76_RS15645 0.41 -0.4 3,270,003 + BWI76_RS15645 0.43 +0.1 3,270,065 - BWI76_RS15645 0.50 +0.4 3,270,128 - BWI76_RS15645 0.57 +0.1 3,270,207 + BWI76_RS15645 0.65 -0.5 3,270,207 + BWI76_RS15645 0.65 -0.1 3,270,454 - -1.8 3,270,507 + -0.2 3,270,612 + -0.0 3,270,771 - BWI76_RS15650 0.21 +0.1 3,271,112 + BWI76_RS15650 0.46 +1.7 3,271,293 + BWI76_RS15650 0.60 +0.3 3,271,323 - BWI76_RS15650 0.62 -0.7 3,271,383 - BWI76_RS15650 0.66 +0.2 3,272,277 + BWI76_RS15655 0.29 +0.2 3,272,345 - BWI76_RS15655 0.33 -0.3 3,272,599 - BWI76_RS15655 0.51 +0.0 3,272,599 - BWI76_RS15655 0.51 -0.1 3,272,633 - BWI76_RS15655 0.53 -0.1
Or see this region's nucleotide sequence