Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2535

Experiment: BG11 with Chloride 0.9765625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Chloride 0.9765625 mM
2,614,813	+		Synpcc7942_2534	0.33	+0.1
2,614,814	-		Synpcc7942_2534	0.33	+0.9
2,614,846	-		Synpcc7942_2534	0.36	-1.3
2,614,942	+		Synpcc7942_2534	0.43	-0.1
2,614,953	+		Synpcc7942_2534	0.44	+0.5
2,614,972	+		Synpcc7942_2534	0.46	-0.9
2,614,972	+		Synpcc7942_2534	0.46	-1.3
2,614,975	-		Synpcc7942_2534	0.46	+2.9
2,614,982	-		Synpcc7942_2534	0.46	+1.3
2,615,419	-		Synpcc7942_2534	0.81	-1.0
2,615,492	+		Synpcc7942_2534	0.87	+0.3
2,615,492	+		Synpcc7942_2534	0.87	-0.4
2,615,492	+				+0.7
2,615,500	-		Synpcc7942_2534	0.87	-0.9
2,615,513	-		Synpcc7942_2534	0.88	-0.5
2,615,533	-		Synpcc7942_2534	0.90	-0.4
2,615,539	+				+0.8
2,615,547	-				+0.6
2,615,570	-				-0.3
2,615,594	+				-0.6
2,615,651	+				-1.0
2,615,695	-				-2.3
2,615,764	-				+1.7
2,615,765	+				-0.2
2,615,785	+				-1.1
2,615,786	+				-1.4
2,615,793	-				-0.6
2,615,804	-				+0.4
2,615,855	-				+0.6
2,615,855	-				-1.6
2,615,855	-				-1.2
2,615,883	+				+0.8
2,615,891	-				+2.3
2,615,891	-				-1.7
2,615,900	+				+0.4
2,615,900	+				+0.2
2,615,976	+				-0.3
2,615,976	+				-0.6
2,615,976	+				+0.4
2,615,976	+				+0.4
2,615,976	+				-0.4
2,615,984	-				+0.4
2,615,984	-				+1.1
2,615,984	-				+2.7
2,615,984	-				+0.2
2,615,993	+				-0.4
2,616,006	-				-0.3
2,616,061	+				-0.4
2,616,062	-				-0.7
2,616,069	-				-0.4
2,616,076	-				+0.4
2,616,086	+				-1.2
2,616,097	+				+1.6
2,616,097	+				+0.1
2,616,102	+				-1.2
2,616,105	-				-0.6
2,616,105	-				+0.1
2,616,112	-				+2.0
2,616,179	-		Synpcc7942_2535	0.11	-1.2
2,616,184	-		Synpcc7942_2535	0.11	-0.7
2,616,196	+		Synpcc7942_2535	0.12	-1.5
2,616,201	+		Synpcc7942_2535	0.12	-0.7
2,616,213	+		Synpcc7942_2535	0.12	-0.1
2,616,235	+		Synpcc7942_2535	0.13	+0.5
2,616,244	+		Synpcc7942_2535	0.13	+0.7
2,616,244	+		Synpcc7942_2535	0.13	+0.6
2,616,244	+				+0.7
2,616,244	+		Synpcc7942_2535	0.13	-0.8
2,616,252	-		Synpcc7942_2535	0.13	-0.5
2,616,252	-		Synpcc7942_2535	0.13	-0.6
2,616,266	-		Synpcc7942_2535	0.14	-2.7
2,616,331	-		Synpcc7942_2535	0.16	-0.6
2,616,334	+		Synpcc7942_2535	0.16	-0.8
2,616,354	-		Synpcc7942_2535	0.16	-0.8
2,616,366	-		Synpcc7942_2535	0.17	-0.3
2,616,443	+		Synpcc7942_2535	0.19	+1.7
2,616,468	-		Synpcc7942_2535	0.20	-0.6
2,616,469	+		Synpcc7942_2535	0.20	+1.3
2,616,471	+		Synpcc7942_2535	0.20	-0.4
2,616,471	+		Synpcc7942_2535	0.20	-0.3
2,616,471	+		Synpcc7942_2535	0.20	-1.6
2,616,471	+		Synpcc7942_2535	0.20	+1.2
2,616,479	-		Synpcc7942_2535	0.20	-1.6
2,616,479	-		Synpcc7942_2535	0.20	-0.2
2,616,479	-		Synpcc7942_2535	0.20	-0.5
2,616,489	-		Synpcc7942_2535	0.21	-0.7
2,616,493	+		Synpcc7942_2535	0.21	-3.7
2,616,496	+		Synpcc7942_2535	0.21	-1.8
2,616,501	-		Synpcc7942_2535	0.21	+0.5
2,616,501	-		Synpcc7942_2535	0.21	-0.3
2,616,501	-		Synpcc7942_2535	0.21	+0.7
2,616,501	-		Synpcc7942_2535	0.21	+0.1
2,616,537	+		Synpcc7942_2535	0.22	-1.6
2,616,545	-		Synpcc7942_2535	0.22	+1.3
2,616,579	-		Synpcc7942_2535	0.23	-0.5
2,616,579	-		Synpcc7942_2535	0.23	-0.7
2,616,587	-		Synpcc7942_2535	0.24	-1.3
2,616,597	+		Synpcc7942_2535	0.24	-0.7
2,616,636	+		Synpcc7942_2535	0.25	+0.7
2,616,641	+		Synpcc7942_2535	0.25	-1.0
2,616,641	+		Synpcc7942_2535	0.25	-1.3
2,616,641	+		Synpcc7942_2535	0.25	+0.5
2,616,641	+		Synpcc7942_2535	0.25	-0.5
2,616,649	-		Synpcc7942_2535	0.25	-0.7
2,616,655	+		Synpcc7942_2535	0.26	-0.8
2,616,686	+		Synpcc7942_2535	0.27	+0.8
2,616,686	+		Synpcc7942_2535	0.27	-1.3
2,616,694	-		Synpcc7942_2535	0.27	-0.6
2,616,713	+		Synpcc7942_2535	0.27	-0.1
2,616,721	-		Synpcc7942_2535	0.28	+0.7
2,616,721	-		Synpcc7942_2535	0.28	-1.1
2,616,733	+		Synpcc7942_2535	0.28	-0.6
2,616,767	+		Synpcc7942_2535	0.29	-0.3
2,616,767	+		Synpcc7942_2535	0.29	-0.7
2,616,777	+		Synpcc7942_2535	0.29	-0.5
2,616,777	+		Synpcc7942_2535	0.29	-1.4
2,616,777	+		Synpcc7942_2535	0.29	+0.3
2,616,785	-		Synpcc7942_2535	0.30	+0.2
2,616,785	-		Synpcc7942_2535	0.30	-1.1
2,616,820	+		Synpcc7942_2535	0.31	-0.6
2,616,820	+		Synpcc7942_2535	0.31	-0.3
2,616,830	-		Synpcc7942_2535	0.31	-0.2
2,616,839	+		Synpcc7942_2535	0.31	-0.2
2,616,839	-		Synpcc7942_2535	0.31	-0.8
2,616,895	+		Synpcc7942_2535	0.33	-1.2
2,616,895	+		Synpcc7942_2535	0.33	-0.0
2,616,903	+		Synpcc7942_2535	0.33	-1.5
2,616,911	-		Synpcc7942_2535	0.33	+0.4
2,616,942	+		Synpcc7942_2535	0.34	-0.3
2,616,950	-		Synpcc7942_2535	0.35	-2.4
2,616,950	-		Synpcc7942_2535	0.35	-0.1
2,616,959	+		Synpcc7942_2535	0.35	+2.3
2,616,967	-		Synpcc7942_2535	0.35	-1.4
2,616,992	-		Synpcc7942_2535	0.36	-0.1
2,617,017	-		Synpcc7942_2535	0.37	-0.3
2,617,058	+		Synpcc7942_2535	0.38	-0.6
2,617,059	-		Synpcc7942_2535	0.38	-0.6
2,617,119	+		Synpcc7942_2535	0.40	-1.5
2,617,150	-		Synpcc7942_2535	0.41	-1.4
2,617,151	+		Synpcc7942_2535	0.41	+0.4
2,617,151	+		Synpcc7942_2535	0.41	+0.1
2,617,211	-		Synpcc7942_2535	0.42	-0.2
2,617,225	-		Synpcc7942_2535	0.43	-1.2
2,617,252	-		Synpcc7942_2535	0.44	-0.1
2,617,252	-		Synpcc7942_2535	0.44	+1.1
2,617,262	-		Synpcc7942_2535	0.44	+1.1
2,617,269	+		Synpcc7942_2535	0.44	-0.3
2,617,279	-		Synpcc7942_2535	0.44	-0.7
2,617,364	+		Synpcc7942_2535	0.47	-0.0
2,617,426	-		Synpcc7942_2535	0.49	-0.5
2,617,468	+		Synpcc7942_2535	0.50	-0.6
2,617,468	+		Synpcc7942_2535	0.50	-2.0
2,617,478	+		Synpcc7942_2535	0.51	-0.1
2,617,520	-		Synpcc7942_2535	0.52	-0.5
2,617,537	-		Synpcc7942_2535	0.52	-0.3
2,617,544	-		Synpcc7942_2535	0.53	+0.5
2,617,550	-		Synpcc7942_2535	0.53	-1.3
2,617,607	-		Synpcc7942_2535	0.54	+1.6
2,617,611	+		Synpcc7942_2535	0.55	-0.3
2,617,611	+		Synpcc7942_2535	0.55	-1.5
2,617,661	+		Synpcc7942_2535	0.56	-0.8
2,617,677	-		Synpcc7942_2535	0.57	+1.1
2,617,684	+		Synpcc7942_2535	0.57	+0.6
2,617,691	+		Synpcc7942_2535	0.57	-2.3
2,617,691	+		Synpcc7942_2535	0.57	-0.6
2,617,691	+		Synpcc7942_2535	0.57	+0.9
2,617,694	-		Synpcc7942_2535	0.57	-0.1
2,617,694	-				+1.7
2,617,710	-		Synpcc7942_2535	0.58	-0.7
2,617,711	-		Synpcc7942_2535	0.58	-1.1
2,617,715	+		Synpcc7942_2535	0.58	-0.3
2,617,740	-		Synpcc7942_2535	0.58	+0.1
2,617,758	+		Synpcc7942_2535	0.59	-0.2
2,617,779	+		Synpcc7942_2535	0.60	+0.4
2,617,806	-		Synpcc7942_2535	0.60	-0.3
2,617,863	-		Synpcc7942_2535	0.62	-2.5
2,617,899	-		Synpcc7942_2535	0.63	-0.0
2,617,899	-		Synpcc7942_2535	0.63	-1.1
2,617,911	+		Synpcc7942_2535	0.64	-0.1
2,617,917	+		Synpcc7942_2535	0.64	+0.0
2,617,919	+		Synpcc7942_2535	0.64	-1.3
2,617,925	-		Synpcc7942_2535	0.64	-2.2
2,617,941	+		Synpcc7942_2535	0.65	+1.6
2,617,941	+		Synpcc7942_2535	0.65	+0.6
2,617,941	-		Synpcc7942_2535	0.65	-0.3
2,617,946	+		Synpcc7942_2535	0.65	-0.3
2,617,949	-		Synpcc7942_2535	0.65	-0.5
2,617,995	+		Synpcc7942_2535	0.66	+0.0
2,618,027	+		Synpcc7942_2535	0.67	-0.5
2,618,051	+		Synpcc7942_2535	0.68	-0.2
2,618,083	-		Synpcc7942_2535	0.69	-0.7
2,618,083	-				+1.3
2,618,083	-		Synpcc7942_2535	0.69	+0.7
2,618,100	+		Synpcc7942_2535	0.69	-1.3
2,618,108	-		Synpcc7942_2535	0.70	-2.1
2,618,142	-		Synpcc7942_2535	0.71	-0.9
2,618,148	+		Synpcc7942_2535	0.71	-1.4
2,618,164	-		Synpcc7942_2535	0.71	-0.2
2,618,210	+		Synpcc7942_2535	0.73	+1.9
2,618,227	-		Synpcc7942_2535	0.73	+0.1
2,618,264	+				+2.3
2,618,267	-		Synpcc7942_2535	0.74	+1.3
2,618,270	+		Synpcc7942_2535	0.75	-0.7
2,618,296	+		Synpcc7942_2535	0.75	-0.2
2,618,308	+		Synpcc7942_2535	0.76	-2.2
2,618,330	+		Synpcc7942_2535	0.76	-0.0
2,618,338	-		Synpcc7942_2535	0.77	-1.6
2,618,346	+		Synpcc7942_2535	0.77	-0.0
2,618,399	+		Synpcc7942_2535	0.78	-1.5
2,618,434	+		Synpcc7942_2535	0.79	-1.0
2,618,435	-		Synpcc7942_2535	0.80	-0.3
2,618,450	+		Synpcc7942_2535	0.80	-0.8
2,618,470	-		Synpcc7942_2535	0.81	+2.3
2,618,476	-		Synpcc7942_2535	0.81	+1.3
2,618,476	-		Synpcc7942_2535	0.81	+0.5
2,618,504	+		Synpcc7942_2535	0.82	-0.5
2,618,556	+		Synpcc7942_2535	0.83	-0.0
2,618,598	+		Synpcc7942_2535	0.84	-2.0
2,618,598	+		Synpcc7942_2535	0.84	+0.8
2,618,620	+		Synpcc7942_2535	0.85	-1.2
2,618,623	-		Synpcc7942_2535	0.85	+0.9
2,618,628	-		Synpcc7942_2535	0.85	-0.3
2,618,630	-		Synpcc7942_2535	0.85	-2.8
2,618,698	+		Synpcc7942_2535	0.87	-0.3
2,618,705	-		Synpcc7942_2535	0.88	-2.2
2,618,705	-		Synpcc7942_2535	0.88	-0.7
2,618,730	-		Synpcc7942_2535	0.88	-1.9
2,618,762	-		Synpcc7942_2535	0.89	-0.6
2,618,809	+				-1.7
2,618,817	-				+0.5
2,618,833	-				-0.1
2,618,859	+				-0.8
2,618,916	-				+0.1
2,618,967	+				-0.6
2,618,970	-				+0.8
2,618,980	-				+0.7
2,618,987	+				-0.8
2,618,987	+				-0.3
2,618,987	+				+1.7
2,618,995	-				-0.7
2,619,000	+				+0.5
2,619,008	-				-0.8
2,619,010	-				-0.5
2,619,015	+				-2.3
2,619,065	-				-2.4
2,619,076	+				-0.3
2,619,082	+				-0.8
2,619,087	+				-0.5
2,619,090	-				+0.5
2,619,090	-				+3.1
2,619,090	-				-1.0
2,619,119	-				+8.8
2,619,124	-				-0.5
2,619,124	-				+1.1
2,619,124	-				-1.0
2,619,146	+				+0.1
2,619,159	-		Synpcc7942_2536	0.12	+0.5
2,619,225	+		Synpcc7942_2536	0.25	+0.9
2,619,258	+		Synpcc7942_2536	0.31	-1.4
2,619,269	-		Synpcc7942_2536	0.33	+0.1
2,619,277	-		Synpcc7942_2536	0.34	-2.1
2,619,291	+		Synpcc7942_2536	0.37	-1.0
2,619,299	+		Synpcc7942_2536	0.39	-1.2
2,619,309	-		Synpcc7942_2536	0.40	-0.7
2,619,320	+		Synpcc7942_2536	0.43	-0.5
2,619,328	-		Synpcc7942_2536	0.44	-0.7
2,619,328	-		Synpcc7942_2536	0.44	-0.6
2,619,374	-		Synpcc7942_2536	0.53	-0.0
2,619,384	+		Synpcc7942_2536	0.54	-1.5
2,619,384	+		Synpcc7942_2536	0.54	-1.3
2,619,392	-		Synpcc7942_2536	0.56	+0.4
2,619,428	-		Synpcc7942_2536	0.63	-0.3
2,619,432	+		Synpcc7942_2536	0.63	-0.4
2,619,448	+		Synpcc7942_2536	0.66	-1.6
2,619,479	+		Synpcc7942_2536	0.72	+0.3
2,619,522	-		Synpcc7942_2536	0.80	-1.2
2,619,550	+		Synpcc7942_2536	0.86	+1.7
2,619,587	+				+1.0
2,619,595	+				-1.2
2,619,595	-				-2.0
2,619,595	-				-0.4
2,619,595	-				-1.9
2,619,595	-				-1.1
2,619,595	-				-0.4
2,619,597	-				-0.4
2,619,629	+				-0.3
2,619,634	+				+2.0
2,619,637	-				-0.5