Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c29570

Experiment: Cytidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine (N)
3,090,205	-				-2.1
3,090,207	+				-3.6
3,090,207	+				-2.1
3,090,207	+				-0.1
3,090,219	-				-1.2
3,090,241	+				-0.7
3,090,241	+				+0.0
3,090,241	+				-1.3
3,090,241	+				-0.8
3,090,241	+				-1.1
3,090,241	+				-0.9
3,090,249	-				-0.3
3,090,259	-				-1.2
3,090,267	+				-1.3
3,090,299	+				-0.9
3,090,299	+				-0.1
3,090,307	-				-0.5
3,090,307	-				-0.8
3,090,309	-				-0.6
3,090,309	-				-0.7
3,090,347	+				-1.7
3,090,347	+				-0.2
3,090,352	-				-1.4
3,090,394	-				-0.0
3,090,397	+				-0.2
3,090,418	+				-1.6
3,090,452	+				-1.9
3,090,476	+				-1.6
3,090,503	+				-1.1
3,090,503	+				-0.5
3,090,516	-				+0.4
3,090,540	-				-0.9
3,090,547	-				-1.2
3,090,560	+				-1.9
3,090,560	+				-2.3
3,090,565	+				-2.2
3,090,568	-				+0.2
3,090,573	-				-1.1
3,090,573	-				-0.6
3,090,575	-				-0.3
3,090,594	+				-0.7
3,090,594	+				-1.4
3,090,594	+				-1.3
3,090,602	-				-1.6
3,090,602	-				-0.9
3,090,602	-				-2.8
3,090,602	-				-0.8
3,090,626	+				+0.3
3,090,626	+				-0.6
3,090,634	-				+1.0
3,090,634	-				-0.4
3,090,634	-				-0.8
3,090,634	-				-1.6
3,090,634	-				+0.7
3,090,634	-				-0.3
3,090,634	-				-0.3
3,090,672	+				+0.2
3,090,672	+				-0.9
3,090,672	+				-1.2
3,090,672	+				-0.7
3,090,680	-				+0.8
3,090,680	-				+0.1
3,090,680	-				-0.9
3,090,680	-				-0.1
3,090,680	-				-1.5
3,090,685	-				+0.2
3,090,707	-				-1.8
3,090,755	+				-0.8
3,090,774	+				-0.8
3,090,826	+				-1.8
3,090,830	+				+0.4
3,090,839	+				-0.0
3,090,839	+				-0.3
3,090,839	-				-0.3
3,090,844	+				-0.0
3,090,854	+				-0.6
3,090,930	+		PGA1_c29560	0.20	-0.3
3,090,946	+		PGA1_c29560	0.25	+1.0
3,090,946	+		PGA1_c29560	0.25	-0.9
3,090,946	+		PGA1_c29560	0.25	-0.1
3,090,959	-		PGA1_c29560	0.28	+0.0
3,090,959	-		PGA1_c29560	0.28	-0.7
3,090,965	+		PGA1_c29560	0.30	-1.4
3,090,986	+		PGA1_c29560	0.36	-0.2
3,091,000	+		PGA1_c29560	0.40	+0.4
3,091,000	+		PGA1_c29560	0.40	+0.6
3,091,000	-		PGA1_c29560	0.40	-0.4
3,091,015	-		PGA1_c29560	0.45	+0.7
3,091,020	-		PGA1_c29560	0.46	-0.8
3,091,048	+		PGA1_c29560	0.54	-0.8
3,091,048	+		PGA1_c29560	0.54	-2.3
3,091,048	+		PGA1_c29560	0.54	-0.7
3,091,056	-		PGA1_c29560	0.57	-0.8
3,091,068	+		PGA1_c29560	0.60	-0.1
3,091,082	-		PGA1_c29560	0.64	-1.3
3,091,106	+		PGA1_c29560	0.71	-2.2
3,091,150	-		PGA1_c29560	0.84	+0.2
3,091,159	+		PGA1_c29560	0.86	-0.7
3,091,222	-				-1.3
3,091,224	-				-0.5
3,091,350	-				-0.4
3,091,404	+		PGA1_c29570	0.10	-1.6
3,091,404	+		PGA1_c29570	0.10	-1.6
3,091,412	-		PGA1_c29570	0.11	-0.6
3,091,428	-		PGA1_c29570	0.12	-0.8
3,091,537	+		PGA1_c29570	0.17	-3.3
3,091,545	-		PGA1_c29570	0.18	-1.6
3,091,545	-		PGA1_c29570	0.18	-3.1
3,091,593	-		PGA1_c29570	0.20	-1.7
3,091,617	-		PGA1_c29570	0.21	-1.0
3,091,623	-		PGA1_c29570	0.22	-1.0
3,091,650	-		PGA1_c29570	0.23	-0.5
3,091,683	+		PGA1_c29570	0.25	-0.5
3,091,683	+		PGA1_c29570	0.25	-3.5
3,091,690	+		PGA1_c29570	0.25	-0.5
3,091,698	-		PGA1_c29570	0.25	-1.4
3,091,726	-		PGA1_c29570	0.27	-1.3
3,091,854	-		PGA1_c29570	0.33	-0.6
3,091,908	+		PGA1_c29570	0.36	-1.8
3,091,992	-		PGA1_c29570	0.41	-1.5
3,092,012	-		PGA1_c29570	0.42	-1.0
3,092,041	+		PGA1_c29570	0.43	-0.1
3,092,041	+		PGA1_c29570	0.43	-2.4
3,092,049	-		PGA1_c29570	0.44	+0.3
3,092,049	-		PGA1_c29570	0.44	+0.4
3,092,054	-		PGA1_c29570	0.44	-0.4
3,092,107	-		PGA1_c29570	0.47	-1.9
3,092,153	-		PGA1_c29570	0.49	-2.5
3,092,203	-		PGA1_c29570	0.51	-1.0
3,092,227	+		PGA1_c29570	0.53	-2.4
3,092,272	+		PGA1_c29570	0.55	-0.5
3,092,272	+		PGA1_c29570	0.55	-0.6
3,092,280	-		PGA1_c29570	0.55	-1.2
3,092,392	-		PGA1_c29570	0.61	-1.8
3,092,409	-		PGA1_c29570	0.62	-0.4
3,092,418	+		PGA1_c29570	0.63	-1.9
3,092,533	-		PGA1_c29570	0.69	-0.6
3,092,543	-		PGA1_c29570	0.69	-1.9
3,092,617	+		PGA1_c29570	0.73	-0.5
3,092,629	+		PGA1_c29570	0.73	-1.0
3,092,629	+		PGA1_c29570	0.73	-0.8
3,092,637	-		PGA1_c29570	0.74	-0.8
3,092,779	+		PGA1_c29570	0.81	+0.4
3,092,779	+		PGA1_c29570	0.81	-2.8
3,092,787	-		PGA1_c29570	0.82	-0.9
3,092,791	-		PGA1_c29570	0.82	-1.4
3,092,793	+		PGA1_c29570	0.82	+0.6
3,092,796	-		PGA1_c29570	0.82	-0.9
3,092,796	-		PGA1_c29570	0.82	-2.2
3,092,799	+		PGA1_c29570	0.82	+0.9
3,092,825	-		PGA1_c29570	0.84	-1.4
3,092,922	+		PGA1_c29570	0.89	-0.9
3,092,928	-		PGA1_c29570	0.89	-0.2
3,092,953	+				+0.3
3,092,953	+				-1.9
3,092,993	-				-1.3
3,093,052	+				-0.2
3,093,060	-				-1.3
3,093,060	-				-0.0
3,093,115	+				-0.9
3,093,140	+				-1.3
3,093,246	-				-0.1
3,093,256	-				-0.6
3,093,256	-				-0.5
3,093,256	-				-0.0
3,093,341	-				+0.3
3,093,362	-				-1.4
3,093,370	+		PGA1_c29580	0.11	-1.5
3,093,377	-		PGA1_c29580	0.11	+0.8
3,093,471	+		PGA1_c29580	0.20	-0.6
3,093,509	+		PGA1_c29580	0.23	-3.1
3,093,517	-		PGA1_c29580	0.24	-0.8
3,093,517	-		PGA1_c29580	0.24	-1.9
3,093,587	-		PGA1_c29580	0.30	-1.1
3,093,592	+		PGA1_c29580	0.30	-3.1
3,093,603	+		PGA1_c29580	0.31	-1.5
3,093,611	-		PGA1_c29580	0.32	-1.1
3,093,626	+		PGA1_c29580	0.34	-0.9
3,093,628	-		PGA1_c29580	0.34	-2.4
3,093,634	-		PGA1_c29580	0.34	-0.7
3,093,634	-		PGA1_c29580	0.34	-0.5
3,093,675	+		PGA1_c29580	0.38	-0.9
3,093,683	-		PGA1_c29580	0.39	-1.2
3,093,683	-		PGA1_c29580	0.39	+0.4
3,093,683	-		PGA1_c29580	0.39	-1.3
3,093,709	+		PGA1_c29580	0.41	+0.2
3,093,717	+		PGA1_c29580	0.42	-0.6
3,093,725	-		PGA1_c29580	0.42	-0.6
3,093,725	-		PGA1_c29580	0.42	-0.2
3,093,737	+		PGA1_c29580	0.43	-1.3
3,093,787	-		PGA1_c29580	0.48	-1.7
3,093,808	+		PGA1_c29580	0.50	-2.2
3,093,808	+		PGA1_c29580	0.50	-2.5
3,093,816	-		PGA1_c29580	0.50	-0.0
3,093,816	-		PGA1_c29580	0.50	-0.3
3,093,816	-		PGA1_c29580	0.50	-2.6
3,093,866	-		PGA1_c29580	0.55	-0.6
3,093,890	+		PGA1_c29580	0.57	-0.6
3,093,890	+		PGA1_c29580	0.57	+0.5
3,093,890	+		PGA1_c29580	0.57	-1.2
3,093,890	+		PGA1_c29580	0.57	-1.2
3,093,898	-		PGA1_c29580	0.58	-0.9
3,093,907	+		PGA1_c29580	0.59	-1.4
3,094,019	-		PGA1_c29580	0.69	-0.3
3,094,019	-		PGA1_c29580	0.69	-2.8
3,094,019	-		PGA1_c29580	0.69	-0.6
3,094,019	-		PGA1_c29580	0.69	-0.1
3,094,070	+		PGA1_c29580	0.73	-1.7
3,094,137	+		PGA1_c29580	0.79	-4.2