Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_29160
Experiment: 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine |
---|---|---|---|---|---|
remove | |||||
6,779,940 | - | AO356_29155 | 0.42 | +0.4 | |
6,780,071 | + | AO356_29155 | 0.54 | +0.1 | |
6,780,299 | + | AO356_29155 | 0.74 | -1.9 | |
6,780,358 | - | AO356_29155 | 0.79 | -0.1 | |
6,780,441 | + | AO356_29155 | 0.87 | -0.9 | |
6,780,541 | + | -0.2 | |||
6,780,542 | - | +0.2 | |||
6,780,607 | - | -0.5 | |||
6,780,607 | - | -0.3 | |||
6,780,735 | - | -1.3 | |||
6,780,747 | + | -0.3 | |||
6,780,747 | + | +0.3 | |||
6,780,747 | + | -1.0 | |||
6,780,748 | - | +0.6 | |||
6,780,748 | - | -1.5 | |||
6,780,748 | - | +0.1 | |||
6,780,763 | - | -0.3 | |||
6,780,771 | + | +0.4 | |||
6,780,771 | + | -0.0 | |||
6,780,772 | - | +0.3 | |||
6,780,772 | - | +0.4 | |||
6,780,772 | - | +0.1 | |||
6,780,772 | - | -0.7 | |||
6,780,995 | - | AO356_29160 | 0.61 | -0.7 | |
6,780,995 | - | AO356_29160 | 0.61 | -0.7 | |
6,781,318 | - | AO356_29165 | 0.18 | +0.1 | |
6,781,605 | + | AO356_29165 | 0.49 | +1.0 | |
6,781,606 | - | AO356_29165 | 0.49 | -0.0 | |
6,781,643 | - | AO356_29165 | 0.53 | -0.0 | |
6,782,105 | + | -0.7 | |||
6,782,110 | - | -0.2 |
Or see this region's nucleotide sequence