Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34990

Experiment: Uridine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Uridine (N)
3,668,809	+				-0.5
3,668,828	-				-0.8
3,668,854	+				+0.7
3,668,854	+				+0.1
3,668,854	+				+0.5
3,668,854	+				+0.8
3,668,862	-				-0.2
3,668,862	-				-1.6
3,668,862	-				-0.2
3,668,862	-				+0.5
3,668,862	-				-0.4
3,668,862	-				-0.8
3,668,862	-				+0.0
3,668,862	-				+0.7
3,668,862	-				-0.0
3,668,862	-				-0.3
3,668,862	-				+1.3
3,668,884	+				-0.9
3,668,884	+				-0.7
3,668,884	+				+1.0
3,668,884	+				+1.0
3,668,892	-				+0.6
3,668,892	-				+1.0
3,668,914	-				-0.6
3,668,976	-				+0.5
3,668,976	-				+0.7
3,668,976	-				+0.0
3,668,978	+				+1.6
3,668,978	+				+0.8
3,669,017	-		PGA1_c34980	0.10	+0.8
3,669,023	-		PGA1_c34980	0.11	-0.0
3,669,091	+		PGA1_c34980	0.19	+1.0
3,669,091	+		PGA1_c34980	0.19	+1.4
3,669,214	+		PGA1_c34980	0.33	-0.3
3,669,247	+		PGA1_c34980	0.37	+1.3
3,669,252	+		PGA1_c34980	0.37	+0.6
3,669,260	-		PGA1_c34980	0.38	-0.8
3,669,260	-		PGA1_c34980	0.38	+1.5
3,669,295	-		PGA1_c34980	0.42	+0.1
3,669,304	-		PGA1_c34980	0.43	+1.6
3,669,372	+		PGA1_c34980	0.51	+0.6
3,669,469	-		PGA1_c34980	0.62	+1.5
3,669,477	-		PGA1_c34980	0.63	+0.0
3,669,505	-		PGA1_c34980	0.66	+0.2
3,669,609	-		PGA1_c34980	0.78	-0.5
3,669,668	-		PGA1_c34980	0.85	-0.4
3,669,668	-		PGA1_c34980	0.85	+0.5
3,669,715	+				+0.2
3,669,722	+				+0.3
3,669,722	+				-0.1
3,669,742	+				+1.5
3,669,854	+				+0.4
3,669,910	-				+1.2
3,670,018	+				+0.8
3,670,026	-				+0.2
3,670,049	-		PGA1_c34990	0.11	+0.5
3,670,111	-		PGA1_c34990	0.14	-0.2
3,670,137	+		PGA1_c34990	0.15	+1.1
3,670,141	+		PGA1_c34990	0.15	+0.6
3,670,231	+		PGA1_c34990	0.19	+0.8
3,670,231	+		PGA1_c34990	0.19	+0.5
3,670,239	-		PGA1_c34990	0.19	+0.8
3,670,266	+		PGA1_c34990	0.20	+0.6
3,670,271	+		PGA1_c34990	0.21	+2.1
3,670,357	+		PGA1_c34990	0.25	+1.7
3,670,365	-		PGA1_c34990	0.25	+0.9
3,670,365	-		PGA1_c34990	0.25	+0.1
3,670,407	-		PGA1_c34990	0.27	+0.6
3,670,412	-		PGA1_c34990	0.27	+1.2
3,670,470	-		PGA1_c34990	0.30	+0.7
3,670,484	-		PGA1_c34990	0.30	-2.0
3,670,506	+		PGA1_c34990	0.31	+1.5
3,670,552	+		PGA1_c34990	0.33	+0.9
3,670,593	+		PGA1_c34990	0.35	+1.4
3,670,601	-		PGA1_c34990	0.35	+2.1
3,670,601	-		PGA1_c34990	0.35	+1.4
3,670,677	+		PGA1_c34990	0.39	-0.2
3,670,704	-		PGA1_c34990	0.40	+1.3
3,670,736	+		PGA1_c34990	0.41	+0.8
3,670,787	-		PGA1_c34990	0.44	+1.6
3,670,808	+		PGA1_c34990	0.45	+1.6
3,670,808	-		PGA1_c34990	0.45	+0.5
3,670,884	+		PGA1_c34990	0.48	+0.2
3,670,904	+		PGA1_c34990	0.49	+1.3
3,670,912	-		PGA1_c34990	0.49	+0.8
3,671,057	-		PGA1_c34990	0.56	+0.7
3,671,057	-		PGA1_c34990	0.56	+1.4
3,671,063	-		PGA1_c34990	0.56	+2.0
3,671,106	-		PGA1_c34990	0.58	+1.5
3,671,168	+		PGA1_c34990	0.60	+0.5
3,671,257	+		PGA1_c34990	0.64	-2.0
3,671,272	+		PGA1_c34990	0.65	+1.7
3,671,303	+		PGA1_c34990	0.66	+0.7
3,671,308	+		PGA1_c34990	0.67	+1.1
3,671,311	-		PGA1_c34990	0.67	+1.4
3,671,311	-		PGA1_c34990	0.67	+1.5
3,671,311	-		PGA1_c34990	0.67	+1.5
3,671,313	+		PGA1_c34990	0.67	+0.8
3,671,349	-		PGA1_c34990	0.68	+0.3
3,671,349	-		PGA1_c34990	0.68	-0.3
3,671,439	-		PGA1_c34990	0.72	+0.6
3,671,441	+		PGA1_c34990	0.73	-0.8
3,671,449	-		PGA1_c34990	0.73	+0.5
3,671,524	+		PGA1_c34990	0.76	+1.6
3,671,529	+		PGA1_c34990	0.76	+1.3
3,671,537	-		PGA1_c34990	0.77	-0.3
3,671,547	+		PGA1_c34990	0.77	+1.0
3,671,555	-		PGA1_c34990	0.78	+0.3
3,671,555	-		PGA1_c34990	0.78	+1.0
3,671,557	+		PGA1_c34990	0.78	+1.5
3,671,560	-		PGA1_c34990	0.78	+0.3
3,671,565	-		PGA1_c34990	0.78	+1.3
3,671,581	+		PGA1_c34990	0.79	+0.8
3,671,674	-		PGA1_c34990	0.83	+0.4
3,671,689	+		PGA1_c34990	0.84	+0.1
3,671,697	-		PGA1_c34990	0.84	+1.0
3,671,702	+		PGA1_c34990	0.84	+0.9
3,671,755	+		PGA1_c34990	0.86	+2.5
3,671,763	-		PGA1_c34990	0.87	+1.6
3,671,763	-		PGA1_c34990	0.87	+0.9
3,671,773	-		PGA1_c34990	0.87	+1.4
3,671,773	-		PGA1_c34990	0.87	+1.5
3,671,773	-		PGA1_c34990	0.87	+0.9
3,671,778	-		PGA1_c34990	0.88	+0.5
3,671,804	+		PGA1_c34990	0.89	+1.5
3,671,820	+		PGA1_c34990	0.89	+1.3
3,671,828	-		PGA1_c34990	0.90	+1.2
3,671,967	+				+0.4
3,671,975	-				+0.8
3,672,061	+				+0.4
3,672,073	+				+1.6
3,672,084	+				+0.7
3,672,091	-				+0.9
3,672,092	+				+1.7
3,672,107	+				+0.6
3,672,107	+				+1.5
3,672,117	-				+0.8
3,672,149	-				-0.2
3,672,194	+				+0.6
3,672,204	-				+0.6
3,672,214	-				+0.6
3,672,228	+				+0.8
3,672,228	+				+0.6
3,672,236	-				+0.8
3,672,280	-				-2.4
3,672,333	+				-0.5
3,672,333	+				-0.1
3,672,396	+				-1.4
3,672,404	-				+0.1
3,672,425	+				-0.3
3,672,607	+		PGA1_c35000	0.15	-0.4
3,672,615	-		PGA1_c35000	0.16	-0.2
3,672,615	-		PGA1_c35000	0.16	-0.6
3,672,630	+		PGA1_c35000	0.16	+0.1
3,672,630	+		PGA1_c35000	0.16	+0.9
3,672,638	-		PGA1_c35000	0.16	+0.7
3,672,638	-		PGA1_c35000	0.16	+1.1
3,672,638	-		PGA1_c35000	0.16	+1.3
3,672,661	+		PGA1_c35000	0.17	+0.2
3,672,685	+		PGA1_c35000	0.18	+1.0
3,672,697	+		PGA1_c35000	0.19	+0.0
3,672,697	+		PGA1_c35000	0.19	+0.3
3,672,705	-		PGA1_c35000	0.19	+1.8
3,672,705	-		PGA1_c35000	0.19	+0.2
3,672,705	-		PGA1_c35000	0.19	-0.1
3,672,705	-		PGA1_c35000	0.19	+0.0
3,672,705	-		PGA1_c35000	0.19	+1.2
3,672,707	+		PGA1_c35000	0.19	+0.0
3,672,707	+		PGA1_c35000	0.19	+1.3
3,672,715	-		PGA1_c35000	0.19	-0.2
3,672,750	+		PGA1_c35000	0.21	-0.9
3,672,751	+		PGA1_c35000	0.21	-0.2
3,672,758	-		PGA1_c35000	0.21	-1.8
3,672,761	+		PGA1_c35000	0.21	+1.3
3,672,871	-		PGA1_c35000	0.25	-0.1
3,673,033	+		PGA1_c35000	0.31	-1.6
3,673,033	+		PGA1_c35000	0.31	+0.8
3,673,033	+		PGA1_c35000	0.31	+0.6
3,673,033	+		PGA1_c35000	0.31	-0.0