Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28050

Experiment: Uridine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Uridine (N)
2,924,233	-		PGA1_c28030	0.70	+0.9
2,924,233	-		PGA1_c28030	0.70	+0.3
2,924,259	+		PGA1_c28030	0.74	+0.2
2,924,355	+		PGA1_c28030	0.89	-0.0
2,924,429	+				+0.0
2,924,438	+				+0.2
2,924,449	+				+0.8
2,924,457	-				+0.1
2,924,494	+				+2.9
2,924,553	+		PGA1_c28040	0.17	+0.0
2,924,576	-		PGA1_c28040	0.20	-0.4
2,924,582	+		PGA1_c28040	0.21	+0.4
2,924,637	+		PGA1_c28040	0.28	+0.9
2,924,643	-		PGA1_c28040	0.29	+0.4
2,924,655	-		PGA1_c28040	0.30	-0.2
2,924,673	-		PGA1_c28040	0.33	-1.4
2,924,722	-		PGA1_c28040	0.39	+0.1
2,924,722	-		PGA1_c28040	0.39	+0.5
2,924,727	+		PGA1_c28040	0.40	+0.8
2,924,729	-		PGA1_c28040	0.40	+0.3
2,924,729	-		PGA1_c28040	0.40	+0.7
2,924,735	-		PGA1_c28040	0.41	+0.0
2,924,749	+		PGA1_c28040	0.42	-0.3
2,924,750	-		PGA1_c28040	0.42	+1.6
2,924,815	-		PGA1_c28040	0.51	+0.6
2,924,871	+		PGA1_c28040	0.58	+0.2
2,924,871	+		PGA1_c28040	0.58	+0.9
2,924,879	-		PGA1_c28040	0.59	+0.7
2,924,879	-		PGA1_c28040	0.59	+1.8
2,924,879	-		PGA1_c28040	0.59	+0.6
2,924,935	-		PGA1_c28040	0.66	+0.7
2,924,957	-		PGA1_c28040	0.69	+1.5
2,925,000	-		PGA1_c28040	0.75	+1.0
2,925,004	+		PGA1_c28040	0.75	-0.7
2,925,009	+		PGA1_c28040	0.76	+0.4
2,925,012	-		PGA1_c28040	0.76	+1.9
2,925,016	+		PGA1_c28040	0.77	+0.1
2,925,017	-		PGA1_c28040	0.77	+0.2
2,925,104	-		PGA1_c28040	0.88	+1.0
2,925,110	+		PGA1_c28040	0.89	+0.4
2,925,146	+				+1.9
2,925,158	-				-0.8
2,925,159	+				-0.0
2,925,163	+				-2.6
2,925,199	+				+0.6
2,925,300	+				+0.7
2,925,300	+				-0.2
2,925,308	-		PGA1_c28050	0.11	+0.3
2,925,308	-		PGA1_c28050	0.11	-1.3
2,925,308	-		PGA1_c28050	0.11	-0.4
2,925,308	-		PGA1_c28050	0.11	-0.1
2,925,348	+		PGA1_c28050	0.14	+1.0
2,925,413	-		PGA1_c28050	0.20	-0.4
2,925,423	+		PGA1_c28050	0.21	+0.8
2,925,423	+		PGA1_c28050	0.21	+1.8
2,925,423	+		PGA1_c28050	0.21	+0.9
2,925,423	+		PGA1_c28050	0.21	+2.1
2,925,423	+		PGA1_c28050	0.21	+1.2
2,925,423	+		PGA1_c28050	0.21	+0.8
2,925,423	+		PGA1_c28050	0.21	-0.0
2,925,423	+		PGA1_c28050	0.21	-1.9
2,925,423	+		PGA1_c28050	0.21	+0.2
2,925,423	+		PGA1_c28050	0.21	+1.4
2,925,423	+		PGA1_c28050	0.21	+1.0
2,925,423	+		PGA1_c28050	0.21	+0.1
2,925,423	+		PGA1_c28050	0.21	-0.1
2,925,423	+		PGA1_c28050	0.21	+0.7
2,925,423	+		PGA1_c28050	0.21	+1.9
2,925,423	+		PGA1_c28050	0.21	+1.4
2,925,423	+		PGA1_c28050	0.21	-0.8
2,925,431	-		PGA1_c28050	0.22	-1.0
2,925,431	-		PGA1_c28050	0.22	-0.8
2,925,431	-		PGA1_c28050	0.22	-1.4
2,925,431	-		PGA1_c28050	0.22	+0.5
2,925,431	-		PGA1_c28050	0.22	+0.3
2,925,431	-		PGA1_c28050	0.22	+0.2
2,925,431	-		PGA1_c28050	0.22	+1.1
2,925,431	-		PGA1_c28050	0.22	+0.1
2,925,431	-		PGA1_c28050	0.22	+0.8
2,925,431	-		PGA1_c28050	0.22	+0.2
2,925,431	-		PGA1_c28050	0.22	+0.6
2,925,431	-		PGA1_c28050	0.22	+0.8
2,925,431	-		PGA1_c28050	0.22	-1.4
2,925,431	-		PGA1_c28050	0.22	+0.0
2,925,431	-		PGA1_c28050	0.22	+0.4
2,925,431	-		PGA1_c28050	0.22	-0.1
2,925,431	-		PGA1_c28050	0.22	+0.1
2,925,431	-		PGA1_c28050	0.22	+0.5
2,925,431	-		PGA1_c28050	0.22	+0.2
2,925,431	-		PGA1_c28050	0.22	+0.6
2,925,431	-		PGA1_c28050	0.22	-0.1
2,925,431	-		PGA1_c28050	0.22	-0.0
2,925,431	-		PGA1_c28050	0.22	+0.8
2,925,441	-		PGA1_c28050	0.23	+0.1
2,925,446	-		PGA1_c28050	0.24	+0.6
2,925,451	-		PGA1_c28050	0.24	+0.9
2,925,479	+		PGA1_c28050	0.27	+1.5
2,925,496	-		PGA1_c28050	0.28	+0.3
2,925,516	+		PGA1_c28050	0.30	+1.1
2,925,529	-		PGA1_c28050	0.31	+1.6
2,925,529	-		PGA1_c28050	0.31	+0.2
2,925,535	-		PGA1_c28050	0.32	+1.6
2,925,535	-		PGA1_c28050	0.32	+1.0
2,925,537	-		PGA1_c28050	0.32	+2.0
2,925,588	+		PGA1_c28050	0.37	-0.5
2,925,594	-		PGA1_c28050	0.37	+0.0
2,925,594	-		PGA1_c28050	0.37	-0.1
2,925,655	+		PGA1_c28050	0.43	+0.7
2,925,668	-		PGA1_c28050	0.44	-0.3
2,925,810	-		PGA1_c28050	0.58	+0.6
2,925,868	+		PGA1_c28050	0.63	+0.5
2,925,911	-		PGA1_c28050	0.67	-0.2
2,925,933	+		PGA1_c28050	0.69	+0.5
2,925,933	+		PGA1_c28050	0.69	+0.6
2,925,933	+		PGA1_c28050	0.69	+0.6
2,925,933	+		PGA1_c28050	0.69	-0.9
2,925,936	-		PGA1_c28050	0.70	-0.6
2,925,941	-		PGA1_c28050	0.70	+1.6
2,925,941	-		PGA1_c28050	0.70	-0.3
2,925,941	-		PGA1_c28050	0.70	-0.4
2,925,941	-		PGA1_c28050	0.70	+0.4
2,925,941	-		PGA1_c28050	0.70	+0.4
2,925,948	-		PGA1_c28050	0.71	+1.1
2,925,948	-		PGA1_c28050	0.71	+0.2
2,925,948	-		PGA1_c28050	0.71	+1.2
2,925,985	+		PGA1_c28050	0.74	-0.4
2,926,000	-		PGA1_c28050	0.76	-0.7
2,926,049	-		PGA1_c28050	0.80	+0.7
2,926,061	-		PGA1_c28050	0.81	+0.8
2,926,078	+		PGA1_c28050	0.83	+1.4
2,926,086	-		PGA1_c28050	0.84	+0.3
2,926,089	+		PGA1_c28050	0.84	-0.9
2,926,089	+		PGA1_c28050	0.84	-0.1
2,926,089	+		PGA1_c28050	0.84	+0.2
2,926,240	+				+0.1
2,926,248	-				-0.4
2,926,253	+				+0.3
2,926,288	+				+1.3
2,926,309	+				+1.1
2,926,385	-				-0.2
2,926,410	+				+0.4
2,926,436	+				-0.4
2,926,469	-				+0.1
2,926,498	-				+0.5
2,926,573	+		PGA1_c28060	0.12	+0.9
2,926,597	-		PGA1_c28060	0.15	+0.4
2,926,625	-		PGA1_c28060	0.17	-0.6
2,926,670	-		PGA1_c28060	0.22	+0.7
2,926,744	+		PGA1_c28060	0.29	+0.3
2,926,771	+		PGA1_c28060	0.32	+0.1
2,926,771	+		PGA1_c28060	0.32	+0.4
2,926,817	-		PGA1_c28060	0.36	+1.6
2,926,825	-		PGA1_c28060	0.37	+1.3
2,926,843	+		PGA1_c28060	0.39	-0.1
2,926,851	-		PGA1_c28060	0.40	-0.4
2,926,885	-		PGA1_c28060	0.43	+0.0
2,926,921	-		PGA1_c28060	0.47	+1.1
2,926,926	-		PGA1_c28060	0.47	+0.0
2,926,926	-		PGA1_c28060	0.47	+1.0
2,926,926	-		PGA1_c28060	0.47	+0.2
2,926,981	+		PGA1_c28060	0.52	+0.3
2,927,062	-		PGA1_c28060	0.60	-0.4
2,927,138	+		PGA1_c28060	0.68	+0.9
2,927,143	+		PGA1_c28060	0.68	-0.1
2,927,196	-		PGA1_c28060	0.74	+0.9
2,927,198	+		PGA1_c28060	0.74	-1.4
2,927,212	+		PGA1_c28060	0.75	+0.7
2,927,212	+		PGA1_c28060	0.75	+0.9