Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23420

Experiment: Uridine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Uridine (N)
2,433,725	+		PGA1_c23410	0.17	+0.7
2,433,733	-		PGA1_c23410	0.18	+0.1
2,433,747	+		PGA1_c23410	0.19	+0.1
2,433,748	-		PGA1_c23410	0.20	+0.2
2,433,770	+		PGA1_c23410	0.22	+1.4
2,433,779	+		PGA1_c23410	0.23	-0.4
2,433,779	+		PGA1_c23410	0.23	+0.3
2,433,779	+		PGA1_c23410	0.23	+0.1
2,433,779	+		PGA1_c23410	0.23	+0.8
2,433,779	+		PGA1_c23410	0.23	-0.5
2,433,779	+		PGA1_c23410	0.23	+0.4
2,433,779	+		PGA1_c23410	0.23	+0.3
2,433,787	-		PGA1_c23410	0.25	+1.1
2,433,787	-		PGA1_c23410	0.25	+0.9
2,433,787	-		PGA1_c23410	0.25	+0.3
2,433,787	-		PGA1_c23410	0.25	+1.6
2,433,854	+		PGA1_c23410	0.33	+0.2
2,433,905	+		PGA1_c23410	0.40	+1.1
2,433,905	+		PGA1_c23410	0.40	+0.9
2,433,905	+		PGA1_c23410	0.40	+0.4
2,433,913	-		PGA1_c23410	0.41	+0.1
2,434,012	+		PGA1_c23410	0.53	-0.0
2,434,025	-		PGA1_c23410	0.55	+1.6
2,434,025	-		PGA1_c23410	0.55	-0.5
2,434,027	-		PGA1_c23410	0.55	+0.6
2,434,039	+		PGA1_c23410	0.57	+0.8
2,434,040	+		PGA1_c23410	0.57	-0.2
2,434,070	+		PGA1_c23410	0.61	-0.1
2,434,075	+		PGA1_c23410	0.61	+0.3
2,434,075	+		PGA1_c23410	0.61	-0.8
2,434,082	+		PGA1_c23410	0.62	+1.7
2,434,082	+		PGA1_c23410	0.62	+0.4
2,434,082	+		PGA1_c23410	0.62	-0.4
2,434,082	+		PGA1_c23410	0.62	+2.0
2,434,082	+		PGA1_c23410	0.62	+0.8
2,434,083	+		PGA1_c23410	0.62	+0.2
2,434,083	+		PGA1_c23410	0.62	-0.9
2,434,083	+		PGA1_c23410	0.62	+0.4
2,434,083	+		PGA1_c23410	0.62	+0.5
2,434,085	-		PGA1_c23410	0.63	-1.1
2,434,090	-		PGA1_c23410	0.63	-0.2
2,434,090	-		PGA1_c23410	0.63	-0.4
2,434,091	-		PGA1_c23410	0.63	+0.5
2,434,091	-		PGA1_c23410	0.63	+1.4
2,434,094	+		PGA1_c23410	0.64	+0.0
2,434,094	+		PGA1_c23410	0.64	-0.3
2,434,094	+		PGA1_c23410	0.64	+0.2
2,434,094	+		PGA1_c23410	0.64	-0.0
2,434,094	+		PGA1_c23410	0.64	+0.1
2,434,094	+		PGA1_c23410	0.64	+1.0
2,434,094	+		PGA1_c23410	0.64	+0.4
2,434,094	+		PGA1_c23410	0.64	-0.8
2,434,094	+		PGA1_c23410	0.64	-0.0
2,434,094	+		PGA1_c23410	0.64	-0.8
2,434,094	+		PGA1_c23410	0.64	-1.4
2,434,094	+		PGA1_c23410	0.64	-0.5
2,434,094	+		PGA1_c23410	0.64	+0.1
2,434,094	+		PGA1_c23410	0.64	-0.8
2,434,094	+		PGA1_c23410	0.64	+0.9
2,434,094	+		PGA1_c23410	0.64	-2.3
2,434,102	-		PGA1_c23410	0.65	-0.2
2,434,102	-		PGA1_c23410	0.65	+0.6
2,434,102	-		PGA1_c23410	0.65	+0.0
2,434,102	-		PGA1_c23410	0.65	+1.4
2,434,102	-		PGA1_c23410	0.65	+0.1
2,434,102	-		PGA1_c23410	0.65	+0.9
2,434,102	-		PGA1_c23410	0.65	+0.9
2,434,102	-		PGA1_c23410	0.65	-0.2
2,434,102	-		PGA1_c23410	0.65	-1.3
2,434,102	-		PGA1_c23410	0.65	+1.4
2,434,102	-		PGA1_c23410	0.65	+1.4
2,434,102	-		PGA1_c23410	0.65	-0.5
2,434,102	-		PGA1_c23410	0.65	-0.6
2,434,102	-		PGA1_c23410	0.65	-1.1
2,434,102	-		PGA1_c23410	0.65	-0.2
2,434,102	-		PGA1_c23410	0.65	+0.9
2,434,127	+		PGA1_c23410	0.68	+0.4
2,434,127	+		PGA1_c23410	0.68	+0.1
2,434,127	+		PGA1_c23410	0.68	+0.3
2,434,127	+		PGA1_c23410	0.68	-1.6
2,434,127	+		PGA1_c23410	0.68	-0.2
2,434,127	+		PGA1_c23410	0.68	+1.8
2,434,127	+		PGA1_c23410	0.68	-0.2
2,434,130	-		PGA1_c23410	0.68	+0.5
2,434,135	-		PGA1_c23410	0.69	-0.7
2,434,135	-		PGA1_c23410	0.69	-1.3
2,434,135	-		PGA1_c23410	0.69	-0.6
2,434,135	-		PGA1_c23410	0.69	-0.3
2,434,135	-		PGA1_c23410	0.69	-0.5
2,434,138	-		PGA1_c23410	0.69	+1.1
2,434,138	-		PGA1_c23410	0.69	-0.7
2,434,219	-		PGA1_c23410	0.80	+1.2
2,434,245	-		PGA1_c23410	0.83	+0.5
2,434,250	-		PGA1_c23410	0.84	-0.2
2,434,270	+		PGA1_c23410	0.86	+0.6
2,434,279	-		PGA1_c23410	0.87	+0.2
2,434,321	+				+2.9
2,434,328	+				-0.3
2,434,328	+				-1.5
2,434,328	+				+0.2
2,434,328	+				-1.0
2,434,336	-				-0.9
2,434,336	-				+1.2
2,434,345	-				-0.5
2,434,352	+				+0.2
2,434,395	+				+0.3
2,434,395	+				-0.2
2,434,399	-				+0.8
2,434,403	-				+0.4
2,434,403	-				+0.4
2,434,403	-				-0.3
2,434,403	-				-0.2
2,434,407	-				+0.6
2,434,409	+				-0.3
2,434,409	+				-0.1
2,434,417	+				+0.1
2,434,425	-				+1.4
2,434,425	-				+0.6
2,434,437	-				-0.7
2,434,448	-				-0.3
2,434,448	-				+0.3
2,434,505	+				-0.2
2,434,505	+				-0.4
2,434,505	+				+0.9
2,434,505	+				+0.5
2,434,505	+				+0.1
2,434,513	-				-0.1
2,434,513	-				-1.4
2,434,519	+				+0.9
2,434,521	+				-1.8
2,434,531	-				-1.0
2,434,535	+				-0.8
2,434,541	-				+0.8
2,434,571	-				-0.1
2,434,583	+				+0.6
2,434,583	+				-1.5
2,434,583	+				-0.8
2,434,583	+				-0.8
2,434,583	+				-0.4
2,434,585	+				-0.2
2,434,585	+				+0.7
2,434,585	+				+1.0
2,434,585	+				-0.5
2,434,585	+				+1.0
2,434,586	-				+0.2
2,434,586	-				-0.1
2,434,586	-				-0.2
2,434,586	-				+0.3
2,434,586	-				-0.7
2,434,591	-				+0.3
2,434,591	-				+0.7
2,434,591	-				-0.5
2,434,591	-				-0.1
2,434,591	-				-1.1
2,434,591	-				-2.2
2,434,591	-				+1.5
2,434,591	-				+2.4
2,434,591	-				+1.2
2,434,593	-				-1.0
2,434,593	-				+0.2
2,434,593	-				-1.8
2,434,593	-				-0.4
2,434,593	-				-0.8
2,434,593	-				+1.2
2,434,608	-				+0.5
2,434,616	-				+1.6
2,434,677	+				+0.2
2,434,677	-				-0.6
2,434,685	-				+0.9
2,434,685	-				-1.1
2,434,690	+				+1.0
2,434,698	+				+0.8
2,434,698	+				-0.1
2,434,708	+				-0.7
2,434,733	+				+0.3
2,434,745	-				+0.1
2,434,746	+				+0.8
2,434,746	+				-1.4
2,434,746	+				-0.1
2,434,754	-				+0.3
2,434,754	-				+0.2
2,434,754	-				-0.2
2,434,754	-				+0.5
2,434,755	-				-0.1
2,434,759	-				+0.7
2,434,770	-				+0.2
2,434,772	+				+0.2
2,434,772	+				+1.0
2,434,777	+				+0.3
2,434,777	+				+0.6
2,434,777	+				-0.4
2,434,777	+				-0.7
2,434,780	-				+0.1
2,434,780	-				-0.3
2,434,785	-				+0.1
2,434,785	-				+1.1
2,434,785	-				-0.8
2,434,813	+				-0.6
2,434,813	+				-0.1
2,434,821	-				+1.9
2,434,822	+				+0.5
2,434,824	+				+0.3
2,434,824	+				+1.2
2,434,824	+				+0.7
2,434,824	+				+0.1
2,434,830	-				+1.4
2,434,832	-				+0.2
2,434,832	-				-0.0
2,434,832	-				-0.7
2,434,833	-				+0.3
2,434,862	+				+1.0
2,434,862	+				+0.6
2,434,862	+				-0.1
2,434,862	+				+1.1
2,434,862	+				+0.5
2,434,862	+				+0.6
2,434,862	+				-0.4
2,434,862	+				+0.9
2,434,862	+				+0.9
2,434,862	+				+0.3
2,434,862	+				-0.4
2,434,862	+				-0.4
2,434,862	+				+0.4
2,434,862	+				-0.2
2,434,862	+				+0.2
2,434,862	+				-0.6
2,434,862	+				+0.9
2,434,862	+				-0.1
2,434,862	+				-1.0
2,434,862	+				-0.2
2,434,867	+				-0.0
2,434,867	+				+1.6
2,434,867	+				-1.3
2,434,870	-				-0.2
2,434,870	-				+1.1
2,434,870	-				-0.0
2,434,870	-				-0.4
2,434,870	-				+0.4
2,434,870	-				-0.2
2,434,870	-				+0.3
2,434,870	-				-0.5
2,434,870	-				+0.9
2,434,870	-				+0.1
2,434,870	-				+0.3
2,434,870	-				+0.2
2,434,870	-				+1.4
2,434,875	-				+0.6
2,434,875	-				-0.1
2,434,875	-				-0.9
2,434,880	-				+0.2
2,434,880	-				+0.4
2,434,903	+				+1.1
2,434,911	-				+0.1
2,434,913	+				-0.0
2,434,921	-				-0.1
2,434,921	-				-2.3
2,434,925	+				+0.2
2,434,928	-				-0.2
2,434,965	+				+0.1
2,434,965	+				+0.1
2,434,973	-				+1.0
2,434,992	+				+1.2
2,434,998	+				+0.9
2,435,002	+				+0.1
2,435,002	+				-0.2
2,435,005	-				+0.1
2,435,005	-				+0.9
2,435,008	-				+0.4
2,435,008	-				+0.3
2,435,010	-				-1.9
2,435,010	-				+1.2
2,435,012	+				-0.1
2,435,020	-				+0.5
2,435,074	-		PGA1_c23420	0.11	+0.3
2,435,076	+		PGA1_c23420	0.11	+0.1
2,435,076	+		PGA1_c23420	0.11	+0.7
2,435,084	-		PGA1_c23420	0.11	-0.2
2,435,095	-		PGA1_c23420	0.11	+0.2
2,435,132	-		PGA1_c23420	0.12	+1.1
2,435,163	-		PGA1_c23420	0.13	+0.4
2,435,165	+		PGA1_c23420	0.13	-0.9
2,435,165	+		PGA1_c23420	0.13	+0.6
2,435,166	+		PGA1_c23420	0.13	+0.6
2,435,173	-		PGA1_c23420	0.14	+0.2
2,435,173	-		PGA1_c23420	0.14	+0.4
2,435,173	-		PGA1_c23420	0.14	-0.4
2,435,173	-		PGA1_c23420	0.14	+0.3
2,435,188	-		PGA1_c23420	0.14	+2.4
2,435,190	+		PGA1_c23420	0.14	+1.2
2,435,190	+		PGA1_c23420	0.14	-0.3
2,435,190	+		PGA1_c23420	0.14	-0.2
2,435,190	+		PGA1_c23420	0.14	+1.1
2,435,190	+		PGA1_c23420	0.14	-0.5
2,435,196	-		PGA1_c23420	0.14	+0.2
2,435,198	-		PGA1_c23420	0.14	+0.2
2,435,198	-		PGA1_c23420	0.14	+0.2
2,435,258	+		PGA1_c23420	0.16	+1.0
2,435,258	+		PGA1_c23420	0.16	-0.2
2,435,408	+		PGA1_c23420	0.21	+0.4
2,435,416	+		PGA1_c23420	0.21	+1.3
2,435,416	+		PGA1_c23420	0.21	+1.6
2,435,450	+		PGA1_c23420	0.22	+0.1
2,435,458	-		PGA1_c23420	0.22	+1.3
2,435,478	+		PGA1_c23420	0.23	+0.3
2,435,503	-		PGA1_c23420	0.24	+0.6
2,435,527	+		PGA1_c23420	0.24	+0.7
2,435,535	-		PGA1_c23420	0.25	-0.2
2,435,587	+		PGA1_c23420	0.26	+0.1
2,435,605	-		PGA1_c23420	0.27	-2.4
2,435,650	+		PGA1_c23420	0.28	+0.3
2,435,687	+		PGA1_c23420	0.29	+0.4
2,435,711	+		PGA1_c23420	0.30	+0.3
2,435,711	+		PGA1_c23420	0.30	+1.0
2,435,719	-		PGA1_c23420	0.30	+0.2
2,435,719	-		PGA1_c23420	0.30	+0.3
2,435,719	-		PGA1_c23420	0.30	+0.6
2,435,719	-		PGA1_c23420	0.30	-1.3
2,435,744	+		PGA1_c23420	0.31	-1.5
2,435,855	+		PGA1_c23420	0.34	-0.1
2,435,926	+		PGA1_c23420	0.36	+1.9
2,435,932	+		PGA1_c23420	0.36	+1.4
2,436,098	+		PGA1_c23420	0.41	+0.4
2,436,108	+		PGA1_c23420	0.42	-0.5
2,436,108	+		PGA1_c23420	0.42	+0.1
2,436,116	-		PGA1_c23420	0.42	+0.4
2,436,116	-		PGA1_c23420	0.42	+1.2
2,436,207	+		PGA1_c23420	0.45	-0.6
2,436,259	+		PGA1_c23420	0.46	+0.6
2,436,278	+		PGA1_c23420	0.47	+1.0
2,436,278	+		PGA1_c23420	0.47	+0.2
2,436,281	-		PGA1_c23420	0.47	+0.3
2,436,281	-		PGA1_c23420	0.47	+0.8
2,436,281	-		PGA1_c23420	0.47	+0.1
2,436,281	-		PGA1_c23420	0.47	+1.6
2,436,286	-		PGA1_c23420	0.47	+0.7
2,436,341	+		PGA1_c23420	0.49	+0.4
2,436,373	-		PGA1_c23420	0.50	+0.5
2,436,378	-		PGA1_c23420	0.50	+1.0
2,436,419	-		PGA1_c23420	0.51	-0.1
2,436,457	-		PGA1_c23420	0.52	+0.1
2,436,463	+		PGA1_c23420	0.52	+0.6
2,436,464	-		PGA1_c23420	0.53	-1.4
2,436,471	-		PGA1_c23420	0.53	+0.1
2,436,529	+		PGA1_c23420	0.54	+0.7
2,436,536	-		PGA1_c23420	0.55	+0.9
2,436,536	-		PGA1_c23420	0.55	-0.2
2,436,537	-		PGA1_c23420	0.55	-0.3
2,436,537	-		PGA1_c23420	0.55	+0.3
2,436,699	+		PGA1_c23420	0.60	+0.1
2,436,727	-		PGA1_c23420	0.60	-0.5
2,436,768	-		PGA1_c23420	0.62	+0.5
2,436,854	-		PGA1_c23420	0.64	+0.6
2,436,859	-		PGA1_c23420	0.64	+0.0
2,436,895	+		PGA1_c23420	0.65	+0.1
2,436,927	-		PGA1_c23420	0.66	-0.4
2,437,044	+		PGA1_c23420	0.70	-0.8
2,437,052	-		PGA1_c23420	0.70	+0.6
2,437,083	+		PGA1_c23420	0.71	-0.3
2,437,091	-		PGA1_c23420	0.71	+1.6
2,437,112	-		PGA1_c23420	0.72	-0.2
2,437,120	+		PGA1_c23420	0.72	+0.3
2,437,128	-		PGA1_c23420	0.73	+0.4
2,437,173	+		PGA1_c23420	0.74	-0.3
2,437,181	-		PGA1_c23420	0.74	+0.4
2,437,181	-		PGA1_c23420	0.74	+1.4
2,437,316	-		PGA1_c23420	0.78	-1.4
2,437,336	+		PGA1_c23420	0.79	-0.4
2,437,346	+		PGA1_c23420	0.79	+0.8
2,437,351	-		PGA1_c23420	0.79	+1.1
2,437,360	-		PGA1_c23420	0.79	-1.1
2,437,361	-		PGA1_c23420	0.80	+0.8
2,437,399	+		PGA1_c23420	0.81	+0.7
2,437,471	+		PGA1_c23420	0.83	+1.4
2,437,479	-		PGA1_c23420	0.83	+1.4
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2,437,942	+				+0.5
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2,437,948	-				+1.2
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2,438,007	+				+0.7
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2,438,015	-				-0.4
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2,438,060	+				+0.5
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2,438,079	+				+0.9
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2,438,131	-				-1.6
2,438,131	-				+1.0
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