Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c17590

Experiment: Uridine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Uridine (N)
1,844,098	+		PGA1_c17580	0.38	+1.0
1,844,157	+		PGA1_c17580	0.42	+2.2
1,844,162	+		PGA1_c17580	0.42	+0.3
1,844,170	-		PGA1_c17580	0.43	-0.1
1,844,176	-		PGA1_c17580	0.43	+0.5
1,844,176	-		PGA1_c17580	0.43	-0.0
1,844,186	-		PGA1_c17580	0.44	+0.4
1,844,186	-		PGA1_c17580	0.44	-0.2
1,844,277	+		PGA1_c17580	0.50	-0.6
1,844,277	+		PGA1_c17580	0.50	-0.9
1,844,277	+		PGA1_c17580	0.50	-0.5
1,844,285	-		PGA1_c17580	0.51	+0.2
1,844,285	-		PGA1_c17580	0.51	+1.2
1,844,285	-		PGA1_c17580	0.51	+0.7
1,844,285	-		PGA1_c17580	0.51	+0.0
1,844,285	-		PGA1_c17580	0.51	-0.2
1,844,285	-		PGA1_c17580	0.51	+0.2
1,844,296	+		PGA1_c17580	0.51	+0.2
1,844,297	+		PGA1_c17580	0.51	-0.4
1,844,302	+		PGA1_c17580	0.52	+1.4
1,844,304	-		PGA1_c17580	0.52	+1.0
1,844,323	+		PGA1_c17580	0.53	-0.8
1,844,348	+		PGA1_c17580	0.55	-0.9
1,844,356	-		PGA1_c17580	0.55	+0.6
1,844,356	-		PGA1_c17580	0.55	+0.8
1,844,371	+		PGA1_c17580	0.56	-0.4
1,844,387	+		PGA1_c17580	0.58	+0.9
1,844,387	+		PGA1_c17580	0.58	-0.2
1,844,387	+		PGA1_c17580	0.58	+0.0
1,844,387	+		PGA1_c17580	0.58	+0.3
1,844,387	+		PGA1_c17580	0.58	-0.1
1,844,387	+		PGA1_c17580	0.58	+0.1
1,844,387	+		PGA1_c17580	0.58	+0.6
1,844,387	-		PGA1_c17580	0.58	-0.1
1,844,395	-		PGA1_c17580	0.58	-0.3
1,844,395	-		PGA1_c17580	0.58	+0.4
1,844,442	+		PGA1_c17580	0.61	-0.7
1,844,442	+		PGA1_c17580	0.61	-1.3
1,844,442	+		PGA1_c17580	0.61	+0.7
1,844,442	+		PGA1_c17580	0.61	+0.2
1,844,450	-		PGA1_c17580	0.62	-0.8
1,844,450	-		PGA1_c17580	0.62	+0.8
1,844,450	-				-1.4
1,844,450	-		PGA1_c17580	0.62	-1.0
1,844,450	-		PGA1_c17580	0.62	-0.3
1,844,450	-		PGA1_c17580	0.62	+0.6
1,844,450	-		PGA1_c17580	0.62	-0.3
1,844,450	-		PGA1_c17580	0.62	-0.0
1,844,450	-		PGA1_c17580	0.62	-0.4
1,844,450	-		PGA1_c17580	0.62	+0.2
1,844,450	-		PGA1_c17580	0.62	+1.4
1,844,452	+		PGA1_c17580	0.62	-1.7
1,844,467	+		PGA1_c17580	0.63	+0.9
1,844,467	+		PGA1_c17580	0.63	-0.2
1,844,470	-		PGA1_c17580	0.63	-1.1
1,844,508	-		PGA1_c17580	0.66	+0.2
1,844,519	+		PGA1_c17580	0.66	+0.9
1,844,519	+		PGA1_c17580	0.66	+1.8
1,844,527	-		PGA1_c17580	0.67	+0.5
1,844,527	-		PGA1_c17580	0.67	-0.5
1,844,527	-		PGA1_c17580	0.67	+0.7
1,844,527	-		PGA1_c17580	0.67	-1.0
1,844,527	-		PGA1_c17580	0.67	+1.1
1,844,527	-		PGA1_c17580	0.67	+0.6
1,844,556	+		PGA1_c17580	0.69	+0.2
1,844,561	+		PGA1_c17580	0.69	+0.1
1,844,561	+		PGA1_c17580	0.69	-0.6
1,844,561	+		PGA1_c17580	0.69	+0.1
1,844,561	+		PGA1_c17580	0.69	+1.1
1,844,561	+		PGA1_c17580	0.69	+0.3
1,844,569	-		PGA1_c17580	0.70	+0.5
1,844,569	-		PGA1_c17580	0.70	+0.5
1,844,569	-		PGA1_c17580	0.70	-0.6
1,844,609	-		PGA1_c17580	0.73	+0.5
1,844,709	+		PGA1_c17580	0.79	-0.6
1,844,756	-		PGA1_c17580	0.83	+0.1
1,844,799	+		PGA1_c17580	0.85	-1.5
1,844,806	+		PGA1_c17580	0.86	-0.1
1,844,806	+		PGA1_c17580	0.86	-0.2
1,844,811	+		PGA1_c17580	0.86	+0.6
1,844,811	+		PGA1_c17580	0.86	+2.4
1,844,811	+		PGA1_c17580	0.86	+1.5
1,844,811	+		PGA1_c17580	0.86	+0.5
1,844,811	+		PGA1_c17580	0.86	-0.2
1,844,811	+		PGA1_c17580	0.86	-0.5
1,844,811	+		PGA1_c17580	0.86	-0.9
1,844,811	+		PGA1_c17580	0.86	-0.6
1,844,814	-		PGA1_c17580	0.86	-0.6
1,844,814	-		PGA1_c17580	0.86	-0.4
1,844,819	-		PGA1_c17580	0.87	-1.8
1,844,819	-		PGA1_c17580	0.87	-0.8
1,844,819	-		PGA1_c17580	0.87	+0.6
1,844,819	-		PGA1_c17580	0.87	-0.8
1,844,827	-		PGA1_c17580	0.87	-0.8
1,844,835	+		PGA1_c17580	0.88	+0.5
1,844,835	-		PGA1_c17580	0.88	-0.2
1,844,845	+		PGA1_c17580	0.89	-0.2
1,844,853	+		PGA1_c17580	0.89	-0.3
1,844,897	+				-0.9
1,844,958	+				+1.0
1,844,964	+				+0.6
1,844,966	-				+0.5
1,844,971	-				+0.4
1,844,978	+				+0.6
1,845,031	+				+0.5
1,845,033	+				+0.8
1,845,034	-				-1.4
1,845,067	-				+1.2
1,845,113	-		PGA1_c17590	0.15	+0.1
1,845,113	-		PGA1_c17590	0.15	-1.0
1,845,129	-		PGA1_c17590	0.20	+1.3
1,845,131	-		PGA1_c17590	0.20	+1.4
1,845,137	+		PGA1_c17590	0.22	+0.8
1,845,143	-		PGA1_c17590	0.24	+0.0
1,845,143	-		PGA1_c17590	0.24	+0.5
1,845,145	-		PGA1_c17590	0.24	-0.1
1,845,145	-		PGA1_c17590	0.24	+0.3
1,845,145	-		PGA1_c17590	0.24	+0.8
1,845,155	-		PGA1_c17590	0.27	+0.1
1,845,155	-		PGA1_c17590	0.27	+0.8
1,845,155	-		PGA1_c17590	0.27	+1.2
1,845,208	-		PGA1_c17590	0.43	-0.1
1,845,209	-		PGA1_c17590	0.43	+0.5
1,845,209	-		PGA1_c17590	0.43	+0.1
1,845,291	+		PGA1_c17590	0.68	+1.4
1,845,313	+		PGA1_c17590	0.74	+0.2
1,845,346	+		PGA1_c17590	0.84	+0.3
1,845,451	-				-1.3
1,845,462	+				+0.3
1,845,462	+				-0.0
1,845,613	-		PGA1_c17600	0.39	-0.4
1,845,822	-				+1.1
1,845,830	-				+0.2
1,845,840	-				+0.0
1,845,899	-				-1.2
1,845,931	-				+1.6
1,845,933	-				+0.3
1,845,954	-				+0.5
1,845,990	-				+0.4
1,845,997	+				-0.6
1,846,077	-		PGA1_c17610	0.17	-0.1
1,846,082	+		PGA1_c17610	0.17	+0.6
1,846,105	-		PGA1_c17610	0.19	+2.2
1,846,123	-		PGA1_c17610	0.21	+0.5
1,846,186	+		PGA1_c17610	0.26	+0.4
1,846,193	+		PGA1_c17610	0.27	+0.0
1,846,194	-		PGA1_c17610	0.27	-0.1
1,846,268	+		PGA1_c17610	0.34	+0.3
1,846,280	+		PGA1_c17610	0.35	+0.4
1,846,298	-		PGA1_c17610	0.36	+1.2
1,846,298	-		PGA1_c17610	0.36	-0.5
1,846,298	-		PGA1_c17610	0.36	-1.0
1,846,304	+		PGA1_c17610	0.37	-1.2
1,846,304	+		PGA1_c17610	0.37	-0.3
1,846,304	+		PGA1_c17610	0.37	-0.1