Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37335

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,852,772	+		RR42_RS37330	0.32	-1.5
3,852,772	+		RR42_RS37330	0.32	-1.0
3,852,773	-		RR42_RS37330	0.32	+0.3
3,852,782	+		RR42_RS37330	0.33	-1.9
3,852,790	+		RR42_RS37330	0.34	-2.7
3,852,790	+		RR42_RS37330	0.34	-1.7
3,852,791	-		RR42_RS37330	0.34	+0.9
3,852,791	-		RR42_RS37330	0.34	-2.1
3,852,985	+		RR42_RS37330	0.49	-2.5
3,852,985	+		RR42_RS37330	0.49	-0.8
3,852,986	-		RR42_RS37330	0.50	-1.4
3,852,986	-		RR42_RS37330	0.50	-0.3
3,852,986	-		RR42_RS37330	0.50	-2.8
3,853,331	+		RR42_RS37330	0.78	+0.3
3,853,369	+		RR42_RS37330	0.81	-0.2
3,853,369	+		RR42_RS37330	0.81	-0.6
3,853,463	-		RR42_RS37330	0.88	-0.4
3,853,578	+				-2.1
3,853,653	+				+1.8
3,853,654	-				+0.6
3,853,654	-				-2.5
3,853,737	+				-1.0
3,853,737	+				+0.2
3,853,737	+				+0.5
3,853,737	+				+0.1
3,853,737	+				+0.4
3,853,738	-				+0.5
3,853,738	-				-0.8
3,853,738	-				+1.4
3,853,738	-				+1.2
3,853,768	-				+0.9
3,853,768	-				-0.2
3,853,949	+		RR42_RS37335	0.15	+0.1
3,854,259	+		RR42_RS37335	0.28	-1.7
3,854,260	-		RR42_RS37335	0.29	-3.1
3,854,268	+		RR42_RS37335	0.29	-0.5
3,854,269	-		RR42_RS37335	0.29	-1.7
3,854,269	-		RR42_RS37335	0.29	+0.5
3,854,478	+		RR42_RS37335	0.38	-0.2
3,854,479	-		RR42_RS37335	0.38	+0.1
3,854,479	-		RR42_RS37335	0.38	-0.5
3,854,479	-		RR42_RS37335	0.38	+0.1
3,854,484	+		RR42_RS37335	0.38	+0.7
3,854,484	+		RR42_RS37335	0.38	-0.7
3,854,485	-		RR42_RS37335	0.38	-1.0
3,854,485	-		RR42_RS37335	0.38	-0.5
3,854,487	+		RR42_RS37335	0.38	+2.3
3,854,488	-		RR42_RS37335	0.38	-0.6
3,854,701	+		RR42_RS37335	0.48	+0.2
3,854,702	-		RR42_RS37335	0.48	+0.1
3,854,702	-		RR42_RS37335	0.48	-1.2
3,854,702	-		RR42_RS37335	0.48	-0.6
3,854,703	+		RR42_RS37335	0.48	-0.2
3,854,710	-		RR42_RS37335	0.48	-0.3
3,854,796	+		RR42_RS37335	0.52	+0.9
3,854,829	-		RR42_RS37335	0.53	-1.4
3,854,881	-				+1.3
3,855,420	+		RR42_RS37335	0.79	+0.8
3,855,421	-		RR42_RS37335	0.79	+1.5
3,855,442	+		RR42_RS37335	0.80	+0.3
3,855,443	-		RR42_RS37335	0.80	-0.2
3,855,565	+		RR42_RS37335	0.85	+0.4
3,855,597	+		RR42_RS37335	0.86	-1.2
3,855,598	-		RR42_RS37335	0.86	-1.1
3,855,598	-		RR42_RS37335	0.86	-1.4
3,855,604	-		RR42_RS37335	0.87	-3.2
3,855,604	-		RR42_RS37335	0.87	+0.4
3,855,604	-		RR42_RS37335	0.87	-0.0
3,856,143	-				-0.0
3,856,366	+		RR42_RS37340	0.14	+0.3
3,856,585	+		RR42_RS37340	0.24	-1.3
3,856,585	+		RR42_RS37340	0.24	+0.0
3,856,585	+		RR42_RS37340	0.24	+1.3
3,856,586	-		RR42_RS37340	0.24	+1.0
3,856,586	-		RR42_RS37340	0.24	-0.4
3,856,586	-		RR42_RS37340	0.24	+2.2
3,856,699	+		RR42_RS37340	0.29	-1.4
3,856,699	+		RR42_RS37340	0.29	-0.4
3,856,700	-		RR42_RS37340	0.29	-0.6
3,856,714	-		RR42_RS37340	0.30	+0.6
3,856,727	-		RR42_RS37340	0.30	+0.2
3,856,727	-		RR42_RS37340	0.30	+1.6
3,856,727	-		RR42_RS37340	0.30	-2.2
3,856,727	-		RR42_RS37340	0.30	+0.2
3,856,816	+		RR42_RS37340	0.35	-1.6
3,856,817	-		RR42_RS37340	0.35	-0.2
3,856,837	+		RR42_RS37340	0.36	-1.4
3,856,837	+		RR42_RS37340	0.36	+0.1
3,856,837	+		RR42_RS37340	0.36	-0.2
3,856,837	+		RR42_RS37340	0.36	+0.3
3,856,837	+		RR42_RS37340	0.36	+0.3
3,856,838	-		RR42_RS37340	0.36	+0.1
3,856,875	+		RR42_RS37340	0.37	-0.5
3,856,875	+		RR42_RS37340	0.37	-2.8