Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37320

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,846,727	+		RR42_RS37315	0.56	+1.9
3,846,752	-		RR42_RS37315	0.57	+0.5
3,846,770	+		RR42_RS37315	0.58	-1.0
3,846,770	+		RR42_RS37315	0.58	+0.3
3,846,770	+		RR42_RS37315	0.58	+0.3
3,846,771	-		RR42_RS37315	0.58	+1.4
3,846,771	-		RR42_RS37315	0.58	+1.7
3,846,782	-		RR42_RS37315	0.59	+1.5
3,846,791	+		RR42_RS37315	0.59	-0.2
3,846,791	+		RR42_RS37315	0.59	+1.6
3,846,811	+		RR42_RS37315	0.60	+0.3
3,846,812	-		RR42_RS37315	0.61	+1.5
3,846,812	-		RR42_RS37315	0.61	+0.2
3,846,866	+		RR42_RS37315	0.63	+0.1
3,846,948	-		RR42_RS37315	0.67	-0.0
3,847,181	+		RR42_RS37315	0.79	+2.1
3,847,181	+		RR42_RS37315	0.79	-1.0
3,847,330	-		RR42_RS37315	0.87	+0.3
3,847,343	-		RR42_RS37315	0.88	+0.3
3,847,460	+				+0.5
3,847,460	+				+1.0
3,847,460	+				-1.5
3,847,460	+				-0.7
3,847,460	+				+0.0
3,847,460	+				-0.9
3,847,460	+				+0.4
3,847,461	-				+0.9
3,847,518	-				-0.3
3,847,585	+				-0.0
3,847,585	+				-0.9
3,847,585	+				+0.9
3,847,586	-				+0.9
3,847,603	+				-3.3
3,847,603	+				+0.9
3,847,603	+				-0.1
3,847,603	+				-1.7
3,847,603	+				-2.4
3,847,604	-				+0.1
3,847,604	-				+0.6
3,847,604	-				+1.3
3,847,604	-				+2.0
3,847,649	-		RR42_RS37320	0.14	+0.5
3,847,729	-		RR42_RS37320	0.38	+0.2
3,848,082	-				-0.6
3,848,082	-				+0.6
3,848,082	-				+0.3
3,848,091	-				-0.2
3,848,102	+				+0.7
3,848,103	-				-0.0
3,848,103	-				-0.2
3,848,174	+				-0.1
3,848,174	+				-0.2
3,848,175	-				+0.3
3,848,229	-				+0.3
3,848,235	+				-1.7
3,848,235	+				-1.7
3,848,235	+				+0.1
3,848,276	+				+0.1
3,848,330	+				+0.2
3,848,384	+				+1.0
3,848,384	+				+0.3
3,848,384	+				+0.3
3,848,384	+				+0.2
3,848,385	-				+0.2
3,848,385	-				+0.1
3,848,385	-				-0.7
3,848,385	-				+0.3
3,848,402	+				+0.9
3,848,403	-				+1.3
3,848,403	-				-0.2
3,848,426	+				-1.6
3,848,427	-				-0.0
3,848,510	+		RR42_RS37325	0.12	-0.7
3,848,510	+		RR42_RS37325	0.12	-0.2
3,848,510	+		RR42_RS37325	0.12	+1.3
3,848,511	-		RR42_RS37325	0.12	-0.2
3,848,573	+				+1.7
3,848,582	+		RR42_RS37325	0.13	-1.9
3,848,588	+		RR42_RS37325	0.13	+1.3
3,848,588	+		RR42_RS37325	0.13	+0.9
3,848,588	+		RR42_RS37325	0.13	+1.1
3,848,589	-		RR42_RS37325	0.13	-1.2
3,848,589	-		RR42_RS37325	0.13	-0.2
3,848,690	+		RR42_RS37325	0.16	-0.5
3,848,691	-				-0.2
3,848,691	-		RR42_RS37325	0.16	+0.8
3,848,849	+		RR42_RS37325	0.19	+0.1
3,848,849	+		RR42_RS37325	0.19	-2.5
3,848,850	-		RR42_RS37325	0.19	-1.8
3,848,850	-		RR42_RS37325	0.19	+1.9
3,848,905	+		RR42_RS37325	0.21	-0.7
3,848,906	-		RR42_RS37325	0.21	-2.4