Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36985

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,752,499	+		RR42_RS36980	0.12	+0.6
3,752,704	+		RR42_RS36980	0.43	+1.3
3,752,880	+		RR42_RS36980	0.69	-0.7
3,752,881	-		RR42_RS36980	0.69	-0.3
3,752,881	-		RR42_RS36980	0.69	-1.4
3,752,928	+		RR42_RS36980	0.76	-2.0
3,752,928	+		RR42_RS36980	0.76	-1.0
3,752,929	-		RR42_RS36980	0.76	-0.8
3,753,167	+				+0.0
3,753,183	-				-0.1
3,753,271	+				+1.3
3,753,271	+				-0.6
3,753,271	+				-0.1
3,753,272	-				-1.2
3,753,370	+		RR42_RS36985	0.21	+0.8
3,753,370	+		RR42_RS36985	0.21	-2.4
3,753,371	-		RR42_RS36985	0.21	-0.5
3,753,371	-		RR42_RS36985	0.21	-1.9
3,753,371	-		RR42_RS36985	0.21	-2.8
3,753,371	-		RR42_RS36985	0.21	+0.9
3,753,518	-		RR42_RS36985	0.39	-0.5
3,753,665	-		RR42_RS36985	0.57	-0.8
3,753,854	+		RR42_RS36985	0.81	-0.1
3,753,855	-		RR42_RS36985	0.81	-0.5
3,754,022	+				-1.8
3,754,023	-				-0.7
3,754,108	+				-0.7
3,754,108	+				-1.1
3,754,108	+				+1.3
3,754,182	+				-0.2
3,754,183	-				+1.1
3,754,190	+				-0.9
3,754,239	-				-0.5
3,754,259	+				-2.7
3,754,260	-				-0.1
3,754,260	-				-1.2
3,754,284	-				+1.6
3,754,284	-				-1.8
3,754,333	+		RR42_RS36990	0.12	-0.8
3,754,334	-		RR42_RS36990	0.13	+0.3
3,754,353	-		RR42_RS36990	0.16	+1.0
3,754,413	-		RR42_RS36990	0.25	+1.3
3,754,478	+		RR42_RS36990	0.36	+0.3
3,754,490	+		RR42_RS36990	0.38	+1.5
3,754,490	+		RR42_RS36990	0.38	-1.0
3,754,490	+		RR42_RS36990	0.38	-0.6
3,754,491	-		RR42_RS36990	0.38	-0.5
3,754,511	+		RR42_RS36990	0.41	+1.6
3,754,511	+		RR42_RS36990	0.41	-0.2
3,754,511	+		RR42_RS36990	0.41	+0.3
3,754,512	-		RR42_RS36990	0.41	-2.5
3,754,512	-		RR42_RS36990	0.41	+0.4
3,754,514	-		RR42_RS36990	0.42	+0.1
3,754,514	-		RR42_RS36990	0.42	-1.7
3,754,649	+		RR42_RS36990	0.64	+1.8
3,754,649	+		RR42_RS36990	0.64	+0.3
3,754,649	+		RR42_RS36990	0.64	-2.0
3,754,649	+		RR42_RS36990	0.64	+1.0
3,754,649	+		RR42_RS36990	0.64	-1.5
3,754,650	-		RR42_RS36990	0.64	-0.8
3,754,650	-		RR42_RS36990	0.64	+0.0
3,754,650	-		RR42_RS36990	0.64	+2.3
3,754,650	-		RR42_RS36990	0.64	-1.1
3,754,650	-		RR42_RS36990	0.64	-1.2
3,754,721	+		RR42_RS36990	0.75	-2.4
3,754,722	-		RR42_RS36990	0.75	+0.3
3,754,748	+		RR42_RS36990	0.80	-3.0
3,754,749	-		RR42_RS36990	0.80	+0.1
3,754,751	-		RR42_RS36990	0.80	+1.3
3,754,751	-		RR42_RS36990	0.80	+0.8
3,754,863	-				+1.3
3,754,882	+				+0.5
3,754,882	+				-0.2
3,754,882	+				-0.5
3,754,883	-				+0.1
3,754,923	-				-2.5
3,754,979	+		RR42_RS36995	0.15	-1.5