Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36780

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,704,952	+		RR42_RS36775	0.77	-0.7
3,704,952	+		RR42_RS36775	0.77	-0.1
3,704,953	-		RR42_RS36775	0.77	+0.3
3,705,306	+				+0.7
3,705,307	-				+1.1
3,705,307	-				-0.4
3,705,310	+				-0.1
3,705,310	+				-0.2
3,705,310	+				+1.6
3,705,310	+				-0.1
3,705,311	-				-2.8
3,705,311	-				-1.0
3,705,379	+				-2.5
3,705,398	+				-0.5
3,705,541	-				+1.7
3,705,563	-				+0.3
3,705,648	-				-2.0
3,705,667	+				+0.5
3,705,776	+				-1.7
3,705,776	+				-1.7
3,705,776	+				-0.7
3,705,787	-				-2.7
3,706,136	-		RR42_RS36780	0.34	-0.2
3,706,490	+		RR42_RS36780	0.60	-0.3
3,706,502	+		RR42_RS36780	0.60	-2.7
3,706,502	+		RR42_RS36780	0.60	+0.9
3,706,502	+		RR42_RS36780	0.60	+1.3
3,706,503	-		RR42_RS36780	0.60	+2.9
3,706,707	-		RR42_RS36780	0.75	+0.4
3,706,707	-		RR42_RS36780	0.75	+0.2
3,707,077	+				-1.1
3,707,077	+				-0.9
3,707,077	+				+0.3
3,707,078	-				-0.4
3,707,129	+		RR42_RS36785	0.11	+0.3
3,707,130	-		RR42_RS36785	0.11	+1.2
3,707,236	+		RR42_RS36785	0.63	-2.2
3,707,305	+				-0.5
3,707,306	-				-0.2
3,707,306	-				+0.7
3,707,560	-		RR42_RS36790	0.19	-2.8
3,707,561	+		RR42_RS36790	0.19	-1.2
3,707,561	+		RR42_RS36790	0.19	+1.1
3,707,580	+		RR42_RS36790	0.22	+0.4
3,707,581	-		RR42_RS36790	0.22	-1.5
3,707,741	+		RR42_RS36790	0.49	-1.8
3,707,741	+		RR42_RS36790	0.49	+1.8
3,707,741	+		RR42_RS36790	0.49	-1.3
3,707,742	-		RR42_RS36790	0.49	+1.3
3,707,877	+		RR42_RS36790	0.71	-0.5
3,707,878	-		RR42_RS36790	0.72	+1.3
3,707,944	-		RR42_RS36790	0.83	-1.0
3,708,054	+				-2.6
3,708,054	+				-0.1
3,708,054	+				-0.2
3,708,054	+				-0.2
3,708,055	-				-0.6