Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35915

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,503,425	-				+0.3
3,503,463	+				-3.2
3,503,463	+				+0.1
3,503,463	+				+0.9
3,503,463	+				+0.5
3,503,463	+				-0.3
3,503,463	+				+1.6
3,503,463	+				+0.8
3,503,464	-				+0.0
3,503,464	-				-0.9
3,503,464	-				+0.3
3,503,464	-				-0.9
3,503,464	-				+0.1
3,503,464	-				-0.7
3,503,727	+		RR42_RS35910	0.42	-0.4
3,503,727	+		RR42_RS35910	0.42	+0.3
3,503,728	-		RR42_RS35910	0.42	-1.9
3,503,728	-		RR42_RS35910	0.42	+0.9
3,503,728	-		RR42_RS35910	0.42	-3.1
3,503,862	+		RR42_RS35910	0.60	+0.9
3,503,862	+		RR42_RS35910	0.60	+0.1
3,503,862	+		RR42_RS35910	0.60	+0.4
3,503,862	+		RR42_RS35910	0.60	+0.0
3,503,863	-		RR42_RS35910	0.60	+0.9
3,503,863	-		RR42_RS35910	0.60	+0.5
3,503,863	-		RR42_RS35910	0.60	-1.5
3,504,046	-		RR42_RS35910	0.85	-0.3
3,504,046	-		RR42_RS35910	0.85	+0.3
3,504,046	-		RR42_RS35910	0.85	-0.3
3,504,046	-		RR42_RS35910	0.85	+1.2
3,504,159	+				+0.5
3,504,159	+				-0.4
3,504,160	-				+0.8
3,504,160	-				-0.1
3,504,160	-				-0.3
3,504,160	-				+1.5
3,504,287	+				+0.2
3,504,311	+				+1.3
3,504,469	+				+0.5
3,504,469	+				-2.6
3,504,469	+				-0.2
3,504,469	+				+1.5
3,504,469	+				-1.8
3,504,470	-				-0.7
3,504,470	-				-2.0
3,505,060	+		RR42_RS35915	0.57	+1.8
3,505,061	-		RR42_RS35915	0.57	-2.3
3,505,373	+		RR42_RS35915	0.83	+1.1
3,505,374	-		RR42_RS35915	0.83	-1.3
3,505,380	+		RR42_RS35915	0.83	+0.5
3,505,420	+		RR42_RS35915	0.87	+1.0
3,505,420	+		RR42_RS35915	0.87	-2.0
3,505,421	-		RR42_RS35915	0.87	+0.3
3,505,679	-				-1.9
3,505,807	-		RR42_RS35920	0.19	+0.1
3,505,808	+		RR42_RS35920	0.20	-2.5
3,505,808	+		RR42_RS35920	0.20	+1.7
3,505,808	+		RR42_RS35920	0.20	-1.4
3,505,808	+		RR42_RS35920	0.20	-0.7
3,505,809	-		RR42_RS35920	0.20	-0.7
3,505,809	-		RR42_RS35920	0.20	-0.2
3,505,809	-		RR42_RS35920	0.20	+0.4
3,505,809	-		RR42_RS35920	0.20	+1.0
3,505,809	-		RR42_RS35920	0.20	-0.8
3,505,809	-		RR42_RS35920	0.20	+0.5
3,505,809	-		RR42_RS35920	0.20	-1.1
3,505,809	-		RR42_RS35920	0.20	+0.7
3,505,809	-		RR42_RS35920	0.20	+0.2
3,505,809	-		RR42_RS35920	0.20	-1.3
3,505,974	+		RR42_RS35920	0.45	+0.4
3,506,081	+		RR42_RS35920	0.62	+0.3
3,506,081	+		RR42_RS35920	0.62	-1.7
3,506,081	+		RR42_RS35920	0.62	-0.0
3,506,082	-		RR42_RS35920	0.62	-1.9
3,506,328	+				+0.1
3,506,328	+				-0.8
3,506,328	+				-0.6
3,506,329	-				+0.6
3,506,329	-				-3.3
3,506,339	+				+0.5