Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35510

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,419,340	+		RR42_RS35505	0.82	+0.6
3,419,341	-		RR42_RS35505	0.82	+1.0
3,419,343	+		RR42_RS35505	0.82	-0.7
3,419,404	-		RR42_RS35505	0.84	+0.8
3,419,404	-		RR42_RS35505	0.84	+1.1
3,419,442	+		RR42_RS35505	0.85	+1.2
3,419,705	+				-0.2
3,419,705	+				-0.7
3,419,706	-				-2.2
3,419,830	+				+1.6
3,419,845	+				-0.8
3,419,845	+				-2.0
3,419,846	-				-0.0
3,419,846	-				+1.3
3,419,852	+				-0.5
3,419,853	-				-0.4
3,419,956	-				-0.7
3,419,997	+				-1.2
3,420,008	+				+0.4
3,420,009	-				-0.4
3,420,009	-				+0.3
3,420,009	-				-0.7
3,420,012	+				+0.7
3,420,013	-				-0.1
3,420,013	-				+0.1
3,420,105	+				-0.2
3,420,203	+				+0.6
3,420,203	+				+0.6
3,420,407	+		RR42_RS35510	0.15	+0.6
3,420,408	-		RR42_RS35510	0.15	-1.0
3,420,408	-		RR42_RS35510	0.15	+0.1
3,420,459	+		RR42_RS35510	0.20	+1.3
3,420,460	-		RR42_RS35510	0.20	+1.3
3,420,460	-		RR42_RS35510	0.20	-1.8
3,420,465	+		RR42_RS35510	0.21	+0.4
3,420,465	+		RR42_RS35510	0.21	-0.5
3,420,466	-		RR42_RS35510	0.21	-0.9
3,420,585	-		RR42_RS35510	0.32	+0.5
3,420,597	+		RR42_RS35510	0.33	-0.3
3,420,598	-		RR42_RS35510	0.33	-1.9
3,420,598	-		RR42_RS35510	0.33	+1.5
3,420,669	+		RR42_RS35510	0.40	+0.3
3,420,716	+		RR42_RS35510	0.44	-1.7
3,420,794	+		RR42_RS35510	0.51	-0.8
3,420,799	-		RR42_RS35510	0.52	-0.6
3,420,825	+		RR42_RS35510	0.54	-0.3
3,420,825	+		RR42_RS35510	0.54	+1.9
3,420,826	-		RR42_RS35510	0.54	+0.2
3,420,910	-		RR42_RS35510	0.62	+0.1
3,421,031	+		RR42_RS35510	0.74	+0.7
3,421,156	-		RR42_RS35510	0.85	-0.7
3,421,192	+		RR42_RS35510	0.89	+0.7
3,421,193	-				-1.7
3,421,210	-				-0.7
3,421,210	-				-2.2
3,421,232	+				+0.2
3,421,233	-				-2.6
3,421,270	-				+0.3
3,421,393	-				+0.0
3,421,446	+				+0.5
3,421,446	+				-2.8
3,421,446	+				+0.6
3,421,446	+				+0.7
3,421,498	+				+0.6
3,421,499	-				-0.5
3,421,523	+				-0.3
3,421,524	-				+0.4
3,421,572	+				-0.6
3,421,572	+				-2.0
3,421,572	+				-1.2
3,421,573	-				+1.0
3,421,603	+				+1.4
3,421,603	+				+1.8
3,421,603	+				+1.1
3,421,604	-				-1.0
3,421,604	-				+1.4
3,421,604	-				+0.2
3,421,604	-				+0.8
3,421,618	-				-2.9
3,421,621	-				+0.8
3,421,648	+				-0.1
3,421,697	+				+0.6
3,421,697	+				-0.2
3,421,697	+				+0.7
3,421,697	+				-1.9
3,421,698	-				-0.1
3,421,758	-				-0.7
3,421,758	-				-0.2
3,421,758	-				-2.2
3,421,782	+				-1.4
3,421,783	-				-0.2
3,421,797	+				-3.4
3,421,797	+				+2.0
3,421,797	+				-0.5
3,421,820	+				-4.1
3,421,820	+				-0.1
3,421,820	+				-0.0
3,421,821	-				-0.8
3,421,821	-				-0.4
3,421,821	-				-0.3
3,421,911	+				-1.3
3,421,950	+				-1.1
3,421,951	-				+0.6
3,421,951	-				-0.0
3,421,980	+				-0.7
3,421,980	+				+1.0
3,421,980	+				-1.9
3,421,985	+				+0.8
3,421,986	-				+0.2
3,421,996	+				+1.1
3,421,997	-				+0.6
3,422,137	+				-1.3
3,422,174	+				-1.1
3,422,175	-				-0.2
3,422,214	-				-0.7
3,422,214	-				-0.1
3,422,219	+				+0.4
3,422,219	+				+0.6
3,422,219	+				+0.6
3,422,220	-				-1.6
3,422,220	-				+1.4
3,422,220	-				+0.2
3,422,222	+				-0.6
3,422,222	+				+1.8
3,422,231	+				+0.5
3,422,231	+				+0.2
3,422,232	-				-1.2
3,422,232	-				+0.7
3,422,233	+				+1.3
3,422,233	+				-0.1
3,422,245	+				-3.3
3,422,246	-				-1.0
3,422,246	-				-0.9
3,422,269	-				-0.1
3,422,269	-				+0.9