Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35495

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,413,330	-				+0.6
3,413,350	+				-0.4
3,413,350	+				+0.6
3,413,351	-				-0.6
3,413,351	-				-1.9
3,413,402	+				-0.6
3,413,403	-				-1.0
3,413,403	-				+0.6
3,413,403	-				-0.4
3,413,491	+		RR42_RS35490	0.19	-3.2
3,413,492	-		RR42_RS35490	0.19	-1.9
3,413,514	-		RR42_RS35490	0.23	-3.4
3,413,577	+		RR42_RS35490	0.32	+1.0
3,413,578	-		RR42_RS35490	0.32	-1.3
3,413,734	+		RR42_RS35490	0.56	-1.0
3,413,735	-		RR42_RS35490	0.56	-1.4
3,413,775	+		RR42_RS35490	0.62	-2.2
3,413,776	-		RR42_RS35490	0.62	+0.3
3,413,838	+		RR42_RS35490	0.71	+0.9
3,413,838	+		RR42_RS35490	0.71	-0.0
3,413,838	+		RR42_RS35490	0.71	+1.4
3,413,838	+		RR42_RS35490	0.71	-0.4
3,413,839	-		RR42_RS35490	0.72	+0.2
3,413,842	-		RR42_RS35490	0.72	+0.3
3,413,979	+				+1.0
3,414,016	-				-0.6
3,414,016	-				-0.7
3,414,097	+				-1.4
3,414,098	-				-1.8
3,414,098	-				+1.4
3,414,098	-				-2.4
3,414,109	-				+0.3
3,414,109	-				+0.7
3,414,125	+				-1.9
3,414,125	+				-0.1
3,414,150	-				+0.4
3,414,153	+				+0.7
3,414,154	-				-0.6
3,414,154	-				-0.9
3,414,400	+				-2.9
3,414,401	-				+1.2
3,414,401	-				+0.2
3,414,565	+		RR42_RS35495	0.17	+1.3
3,414,568	+		RR42_RS35495	0.18	-0.5
3,414,568	+		RR42_RS35495	0.18	-0.5
3,414,569	-		RR42_RS35495	0.18	-0.7
3,414,623	+		RR42_RS35495	0.21	-0.3
3,414,624	-		RR42_RS35495	0.22	+1.9
3,414,624	-		RR42_RS35495	0.22	-1.8
3,414,817	-		RR42_RS35495	0.35	-0.1
3,414,855	-		RR42_RS35495	0.38	+0.6
3,414,855	-		RR42_RS35495	0.38	+0.5
3,414,855	-		RR42_RS35495	0.38	+0.8
3,414,874	-		RR42_RS35495	0.39	-0.6
3,414,927	+		RR42_RS35495	0.43	+0.1
3,415,117	-		RR42_RS35495	0.56	+0.6
3,415,136	-		RR42_RS35495	0.58	-1.5
3,415,136	-		RR42_RS35495	0.58	-1.7
3,415,205	+		RR42_RS35495	0.63	-2.0
3,415,214	-		RR42_RS35495	0.63	+0.9
3,415,214	-		RR42_RS35495	0.63	-0.3
3,415,287	+		RR42_RS35495	0.68	+0.5
3,415,288	-		RR42_RS35495	0.68	-0.9
3,415,328	-		RR42_RS35495	0.71	+0.1
3,415,736	+				+0.3
3,415,736	+				-0.0
3,415,736	+				+2.3
3,415,736	+				-0.5
3,415,737	-				-0.4
3,415,904	+				-1.5
3,415,905	-				-0.4
3,415,976	+		RR42_RS35500	0.13	-0.2
3,415,995	+		RR42_RS35500	0.15	-2.6
3,415,996	-		RR42_RS35500	0.15	-2.4
3,416,332	+		RR42_RS35500	0.50	-3.6
3,416,405	+		RR42_RS35500	0.58	-0.1
3,416,405	+		RR42_RS35500	0.58	-0.7
3,416,406	-		RR42_RS35500	0.58	-3.4
3,416,475	+		RR42_RS35500	0.66	-1.2
3,416,475	+		RR42_RS35500	0.66	-0.0
3,416,476	-		RR42_RS35500	0.66	-2.9
3,416,476	-		RR42_RS35500	0.66	+0.2
3,416,590	-		RR42_RS35500	0.78	+0.5
3,416,590	-		RR42_RS35500	0.78	-0.5