Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34870

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,272,818	+		RR42_RS34860	0.85	-1.3
3,272,818	+		RR42_RS34860	0.85	-1.6
3,272,818	+		RR42_RS34860	0.85	+0.7
3,272,818	+		RR42_RS34860	0.85	-2.3
3,272,819	-		RR42_RS34860	0.85	-0.5
3,272,819	-		RR42_RS34860	0.85	-2.5
3,272,823	+		RR42_RS34860	0.85	+0.4
3,272,823	+		RR42_RS34860	0.85	-0.2
3,272,824	-		RR42_RS34860	0.85	-0.7
3,272,824	-		RR42_RS34860	0.85	+1.3
3,272,950	+				-2.9
3,272,990	+				+0.9
3,272,991	-				-0.4
3,273,073	-				-0.2
3,273,120	+				-0.4
3,273,179	+		RR42_RS34865	0.16	+0.6
3,273,179	+		RR42_RS34865	0.16	-1.5
3,273,179	+		RR42_RS34865	0.16	-1.3
3,273,180	-		RR42_RS34865	0.17	+0.6
3,273,219	-		RR42_RS34865	0.30	+1.0
3,273,219	-		RR42_RS34865	0.30	-0.6
3,273,386	+		RR42_RS34865	0.86	+0.1
3,273,387	-		RR42_RS34865	0.87	+0.1
3,273,471	+				-0.5
3,273,471	+				+0.2
3,273,471	+				+1.5
3,273,471	+				-1.1
3,273,475	+				-0.3
3,273,476	-				+0.7
3,273,559	-				-0.2
3,273,633	-				+1.3
3,274,299	-		RR42_RS34870	0.44	+0.0
3,274,426	+		RR42_RS34870	0.53	+0.4
3,274,426	+		RR42_RS34870	0.53	+0.7
3,274,498	-		RR42_RS34870	0.58	-1.3
3,274,694	+		RR42_RS34870	0.71	-0.7
3,274,737	+		RR42_RS34870	0.74	-0.1
3,274,762	-		RR42_RS34870	0.75	+2.3
3,274,928	+		RR42_RS34870	0.86	-0.2
3,274,929	-		RR42_RS34870	0.86	+1.1
3,274,931	+		RR42_RS34870	0.86	+1.6
3,274,931	+		RR42_RS34870	0.86	+0.5
3,274,977	-		RR42_RS34870	0.90	+0.7
3,275,069	+				-0.7
3,275,069	+				+0.5
3,275,486	+		RR42_RS34875	0.74	+0.3
3,275,599	+				-1.7
3,275,625	+				+0.6
3,275,626	-				-0.7
3,275,724	+				+0.3
3,275,724	+				-0.6
3,275,765	+				-1.3
3,275,804	+				-0.1