Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34600

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,203,626	+		RR42_RS34595	0.75	+0.9
3,203,686	+		RR42_RS34595	0.78	+0.5
3,203,687	-		RR42_RS34595	0.78	-1.8
3,203,730	-		RR42_RS34595	0.80	-3.1
3,203,731	+		RR42_RS34595	0.80	+0.1
3,203,731	+		RR42_RS34595	0.80	+1.0
3,203,731	+		RR42_RS34595	0.80	+0.8
3,203,731	+		RR42_RS34595	0.80	+0.5
3,203,731	+		RR42_RS34595	0.80	-2.1
3,203,732	-		RR42_RS34595	0.80	+1.4
3,203,732	-		RR42_RS34595	0.80	+0.4
3,204,026	-				+0.2
3,204,178	+				-2.1
3,204,179	-				-1.3
3,204,273	-				+0.4
3,204,273	-				-2.1
3,204,281	+				-0.1
3,204,281	+				+1.1
3,204,281	+				+0.6
3,204,282	-				+3.6
3,204,282	-				-1.4
3,204,282	-				+1.2
3,204,285	+				-0.5
3,204,285	+				-2.5
3,204,300	+				-0.3
3,204,300	+				+1.1
3,204,300	+				+0.2
3,204,300	+				-2.1
3,204,301	-				+0.5
3,204,301	-				+0.6
3,204,301	-				-1.8
3,204,478	-				+0.2
3,204,600	+		RR42_RS34600	0.19	-1.5
3,204,601	-		RR42_RS34600	0.19	+0.9
3,204,630	+		RR42_RS34600	0.22	-1.3
3,204,631	-		RR42_RS34600	0.22	+1.4
3,204,631	-		RR42_RS34600	0.22	-0.3
3,204,698	+		RR42_RS34600	0.30	+0.8
3,204,698	+		RR42_RS34600	0.30	-3.8
3,204,699	-		RR42_RS34600	0.30	+0.5
3,204,699	-		RR42_RS34600	0.30	-1.2
3,204,699	-		RR42_RS34600	0.30	-0.1
3,204,699	-		RR42_RS34600	0.30	-1.0
3,204,926	-		RR42_RS34600	0.54	-0.5
3,204,945	+		RR42_RS34600	0.56	-3.0
3,204,945	+		RR42_RS34600	0.56	-0.3
3,205,140	+		RR42_RS34600	0.77	+0.1
3,205,140	+		RR42_RS34600	0.77	+0.8
3,205,171	+		RR42_RS34600	0.80	-3.4
3,205,172	-		RR42_RS34600	0.80	+0.6
3,205,172	-		RR42_RS34600	0.80	+0.4
3,205,172	-		RR42_RS34600	0.80	+1.6
3,205,194	+		RR42_RS34600	0.82	+1.3
3,205,194	+		RR42_RS34600	0.82	+1.2
3,205,195	-		RR42_RS34600	0.83	+0.7
3,205,227	+		RR42_RS34600	0.86	+0.4
3,205,245	+		RR42_RS34600	0.88	-1.1
3,205,245	+		RR42_RS34600	0.88	-0.2
3,205,245	+		RR42_RS34600	0.88	+0.6
3,205,246	-		RR42_RS34600	0.88	+1.0
3,205,302	+				-2.1
3,205,303	-				+1.8
3,205,334	+				+0.6
3,205,334	+				-0.4
3,205,334	+				-2.8
3,205,334	+				-0.3
3,205,341	-				+1.5
3,205,356	+				-1.7
3,205,357	-				+1.0
3,205,368	+				+0.5
3,205,368	+				-3.8
3,205,533	+				+0.8
3,205,534	-				+0.2
3,205,605	-				-0.3
3,205,614	+				+0.6
3,205,624	-		RR42_RS34605	0.10	-1.3
3,205,624	-		RR42_RS34605	0.10	-1.1
3,205,870	-		RR42_RS34605	0.37	-1.0
3,206,047	-		RR42_RS34605	0.57	+1.4
3,206,124	+		RR42_RS34605	0.66	-1.8