Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34545

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,188,723	+		RR42_RS34540	0.70	-1.1
3,188,774	-		RR42_RS34540	0.72	-0.2
3,188,809	+		RR42_RS34540	0.73	+0.0
3,188,810	-		RR42_RS34540	0.73	+1.2
3,188,818	-		RR42_RS34540	0.73	-1.8
3,188,823	-		RR42_RS34540	0.73	-0.7
3,188,834	+		RR42_RS34540	0.74	+1.0
3,189,050	-		RR42_RS34540	0.82	+0.0
3,189,050	-		RR42_RS34540	0.82	+1.0
3,189,082	+		RR42_RS34540	0.83	+0.2
3,189,109	+		RR42_RS34540	0.84	+0.8
3,189,109	+		RR42_RS34540	0.84	-0.1
3,189,110	-		RR42_RS34540	0.84	-0.5
3,189,238	+		RR42_RS34540	0.89	-0.6
3,189,239	-		RR42_RS34540	0.89	-2.7
3,189,239	-		RR42_RS34540	0.89	+1.4
3,189,719	+				-0.2
3,189,719	+				-1.1
3,189,719	+				+2.0
3,189,720	-				-0.3
3,189,720	-				+0.5
3,189,841	+		RR42_RS34545	0.13	+0.8
3,189,841	+		RR42_RS34545	0.13	+0.4
3,189,841	+		RR42_RS34545	0.13	-0.3
3,189,841	+		RR42_RS34545	0.13	-1.3
3,189,841	+		RR42_RS34545	0.13	-1.1
3,189,904	-		RR42_RS34545	0.16	+0.2
3,189,904	-		RR42_RS34545	0.16	+0.8
3,189,999	+		RR42_RS34545	0.20	-0.6
3,190,322	+		RR42_RS34545	0.34	+2.0
3,190,323	-		RR42_RS34545	0.34	+0.9
3,190,323	-		RR42_RS34545	0.34	+1.5
3,190,365	-		RR42_RS34545	0.36	-2.0
3,190,381	-		RR42_RS34545	0.37	-1.0
3,190,498	-		RR42_RS34545	0.42	-1.5
3,191,052	-		RR42_RS34545	0.66	-1.1
3,191,056	-		RR42_RS34545	0.66	-1.1
3,191,056	-		RR42_RS34545	0.66	-1.6
3,191,813	+				+1.1
3,191,813	+				+0.8
3,191,844	-				+0.4
3,191,853	-				-0.3
3,191,853	-				+1.0
3,192,009	+				-2.1
3,192,387	-				+2.0
3,192,398	+				+0.3
3,192,398	+				+1.4
3,192,500	+				+1.4
3,192,579	+				+0.8
3,192,581	+				-1.1
3,192,591	+				-0.3
3,192,593	+				-2.9
3,192,593	+				+1.1
3,192,593	+				+0.7
3,192,593	+				-0.1
3,192,593	+				-0.9
3,192,593	+				+0.0
3,192,594	-				+0.5
3,192,594	-				+1.5
3,192,695	+		RR42_RS34550	0.13	-0.2
3,192,732	+		RR42_RS34550	0.14	-1.3
3,192,733	-		RR42_RS34550	0.14	-3.3
3,192,809	+		RR42_RS34550	0.17	-0.2