Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34370

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,134,828	+		RR42_RS34360	0.81	+0.3
3,134,828	+		RR42_RS34360	0.81	-1.2
3,134,957	-				+0.3
3,135,027	-				+1.7
3,135,058	-				+0.3
3,135,135	+		RR42_RS34365	0.18	+0.6
3,135,135	+		RR42_RS34365	0.18	+0.7
3,135,135	+		RR42_RS34365	0.18	+0.1
3,135,136	-		RR42_RS34365	0.18	+0.6
3,135,144	+		RR42_RS34365	0.21	+0.8
3,135,159	+		RR42_RS34365	0.26	+0.3
3,135,159	+		RR42_RS34365	0.26	-0.2
3,135,159	+		RR42_RS34365	0.26	-0.6
3,135,160	-		RR42_RS34365	0.26	+1.2
3,135,167	-		RR42_RS34365	0.29	-1.7
3,135,377	+				-1.0
3,135,523	-				+1.0
3,135,527	+				-1.2
3,135,528	-				+1.2
3,135,528	-				+0.9
3,135,528	-				-2.9
3,135,533	+				-1.1
3,135,533	+				+1.7
3,135,534	-				+0.3
3,135,534	-				+0.4
3,135,598	-				-0.1
3,135,677	-		RR42_RS34370	0.18	-2.2
3,135,677	-		RR42_RS34370	0.18	-2.7
3,135,677	-		RR42_RS34370	0.18	+0.6
3,135,684	-		RR42_RS34370	0.19	-0.4
3,135,715	+		RR42_RS34370	0.25	-1.8
3,135,716	-		RR42_RS34370	0.25	-0.3
3,135,947	-		RR42_RS34370	0.68	+1.0
3,135,961	+		RR42_RS34370	0.71	+1.0
3,135,962	-		RR42_RS34370	0.71	-0.4
3,135,976	+		RR42_RS34370	0.73	+1.3
3,135,976	+		RR42_RS34370	0.73	+1.2
3,135,976	+		RR42_RS34370	0.73	-0.9
3,135,977	-		RR42_RS34370	0.74	-2.2
3,136,040	+		RR42_RS34370	0.85	-2.1
3,136,058	-		RR42_RS34370	0.89	-1.1
3,136,175	+				-1.4
3,136,175	+				-0.8
3,136,175	+				-1.1
3,136,175	+				+0.6
3,136,176	-				+0.8
3,136,193	+				+1.1
3,136,303	-		RR42_RS34375	0.45	+0.2
3,136,304	+		RR42_RS34375	0.46	-1.0
3,136,304	+		RR42_RS34375	0.46	+1.4
3,136,304	+		RR42_RS34375	0.46	+0.2
3,136,305	-		RR42_RS34375	0.46	-0.9
3,136,305	-		RR42_RS34375	0.46	-0.5
3,136,305	-		RR42_RS34375	0.46	-0.1
3,136,305	-		RR42_RS34375	0.46	+0.5
3,136,305	-		RR42_RS34375	0.46	+0.3
3,136,305	-		RR42_RS34375	0.46	+1.1
3,136,305	-		RR42_RS34375	0.46	+1.7
3,136,305	-		RR42_RS34375	0.46	-0.4
3,136,305	-		RR42_RS34375	0.46	-0.6
3,136,305	-		RR42_RS34375	0.46	+0.5
3,136,305	-		RR42_RS34375	0.46	+2.3
3,136,728	+				+0.5
3,136,728	+				+0.1
3,136,767	+				+1.9
3,136,767	+				+0.4
3,136,768	-				+2.1
3,136,849	+				+0.4
3,137,040	+				-2.4
3,137,040	+				-0.2
3,137,040	+				-2.1
3,137,083	-				-1.4
3,137,083	-				-0.7