Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34125

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,083,200	+				-3.4
3,083,200	+				-0.5
3,083,200	+				-0.2
3,083,200	+				+1.9
3,083,270	+				-0.3
3,083,271	-				-0.4
3,083,518	+		RR42_RS34115	0.35	+1.4
3,083,518	+		RR42_RS34115	0.35	-0.4
3,083,519	-		RR42_RS34115	0.35	-1.2
3,083,617	+		RR42_RS34115	0.84	+1.1
3,083,618	-		RR42_RS34115	0.85	-1.4
3,083,685	+				-1.8
3,083,685	+				-0.2
3,083,691	-				-0.2
3,083,743	-		RR42_RS34120	0.17	-0.4
3,083,745	-		RR42_RS34120	0.17	-2.7
3,083,745	-		RR42_RS34120	0.17	+0.4
3,083,745	-		RR42_RS34120	0.17	-0.0
3,083,785	-		RR42_RS34120	0.26	-0.1
3,083,796	+		RR42_RS34120	0.29	+1.5
3,083,797	-		RR42_RS34120	0.29	-0.1
3,083,797	-		RR42_RS34120	0.29	-0.5
3,083,851	+		RR42_RS34120	0.42	-1.0
3,083,851	+		RR42_RS34120	0.42	-2.5
3,083,851	+		RR42_RS34120	0.42	-1.1
3,083,852	-		RR42_RS34120	0.42	+0.8
3,083,852	-		RR42_RS34120	0.42	-1.6
3,083,852	-		RR42_RS34120	0.42	-0.9
3,083,852	-		RR42_RS34120	0.42	-0.3
3,083,853	-		RR42_RS34120	0.43	+0.8
3,083,981	+		RR42_RS34120	0.73	+1.1
3,083,982	-		RR42_RS34120	0.73	-0.3
3,084,099	+				+1.1
3,084,100	-				+0.1
3,084,129	-				-2.1
3,084,421	-		RR42_RS34125	0.30	-1.1
3,084,678	+		RR42_RS34125	0.55	+1.2
3,084,678	+		RR42_RS34125	0.55	-1.8
3,084,715	-		RR42_RS34125	0.59	-0.3
3,084,715	-		RR42_RS34125	0.59	+0.6
3,084,715	-		RR42_RS34125	0.59	+1.0
3,084,854	+		RR42_RS34125	0.72	-2.8
3,084,855	-		RR42_RS34125	0.72	+0.2
3,084,855	-		RR42_RS34125	0.72	-0.1
3,084,869	-		RR42_RS34125	0.74	-0.5
3,084,950	+		RR42_RS34125	0.82	-0.6
3,084,951	-		RR42_RS34125	0.82	+0.4
3,085,080	+				-0.1
3,085,080	+				+1.3
3,085,080	+				+0.2
3,085,080	+				-0.1
3,085,133	+				+0.1
3,085,134	-				+0.2
3,085,134	-				+1.1
3,085,165	+				-0.5
3,085,165	+				+0.3
3,085,166	-				+0.1
3,085,166	-				-2.7
3,085,178	+				+0.3
3,085,186	+				+0.6
3,085,187	-				-1.8
3,085,401	+		RR42_RS34130	0.18	+0.2
3,085,590	+		RR42_RS34130	0.39	+0.9
3,085,742	+		RR42_RS34130	0.55	-0.6
3,085,743	-		RR42_RS34130	0.55	-2.5
3,085,743	-		RR42_RS34130	0.55	+0.6
3,085,752	+		RR42_RS34130	0.56	-1.9
3,085,753	-		RR42_RS34130	0.56	-1.9
3,085,753	-		RR42_RS34130	0.56	-0.3
3,085,753	-		RR42_RS34130	0.56	-1.7
3,085,805	+		RR42_RS34130	0.62	-0.1
3,085,805	+		RR42_RS34130	0.62	+1.8
3,085,806	-		RR42_RS34130	0.62	+0.1
3,085,806	-		RR42_RS34130	0.62	-0.2
3,085,808	-		RR42_RS34130	0.62	-0.1
3,085,843	+		RR42_RS34130	0.66	+0.4
3,085,949	-		RR42_RS34130	0.77	+1.0
3,085,996	-		RR42_RS34130	0.82	-2.9
3,086,001	+		RR42_RS34130	0.83	-1.1
3,086,001	+		RR42_RS34130	0.83	-2.2
3,086,016	-		RR42_RS34130	0.85	-1.4
3,086,130	-				-1.6
3,086,130	-				-1.2