Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34095

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,077,325	+				-1.6
3,077,326	-				-0.1
3,077,326	-				+1.7
3,077,326	-				-0.3
3,077,326	-				-2.7
3,077,347	-				-2.4
3,077,347	-				+0.3
3,077,349	+				-0.4
3,077,350	-				+1.1
3,077,381	+				-1.4
3,077,381	+				+0.2
3,077,382	-				-1.4
3,077,382	-				-0.4
3,077,388	+				-2.1
3,077,388	+				+1.5
3,077,388	+				-1.8
3,077,388	+				+0.5
3,077,388	+				-0.2
3,077,389	-				-0.4
3,077,389	-				+1.7
3,077,389	-				+1.4
3,077,488	-				+1.9
3,077,595	+				+1.8
3,077,595	+				-1.6
3,077,596	-				-1.0
3,077,596	-				-2.2
3,077,598	+				-0.9
3,077,599	-				-0.3
3,077,599	-				-1.1
3,077,599	-				+0.7
3,077,770	+				-0.4
3,077,771	-				-2.8
3,077,934	-				+0.5
3,077,951	+				+2.2
3,077,974	+				+0.1
3,077,986	-				+0.8
3,078,055	+				-0.3
3,078,055	+				-2.1
3,078,056	-				+1.2
3,078,067	+				-1.3
3,078,068	-				+0.3
3,078,068	-				+0.7
3,078,068	-				+1.4
3,078,330	-		RR42_RS34095	0.14	-0.3
3,078,368	+		RR42_RS34095	0.20	-0.9
3,078,368	+		RR42_RS34095	0.20	+0.5
3,078,369	-		RR42_RS34095	0.20	+0.2
3,078,372	+		RR42_RS34095	0.20	+1.5
3,078,372	+		RR42_RS34095	0.20	-1.8
3,078,372	+		RR42_RS34095	0.20	-2.1
3,078,373	-		RR42_RS34095	0.21	-3.2
3,078,373	-		RR42_RS34095	0.21	-1.4
3,078,423	+		RR42_RS34095	0.28	-1.4
3,078,423	+		RR42_RS34095	0.28	+0.8
3,078,424	-		RR42_RS34095	0.28	-1.6
3,078,449	+		RR42_RS34095	0.31	+0.3
3,078,502	+		RR42_RS34095	0.39	+0.1
3,078,502	+		RR42_RS34095	0.39	-1.5
3,078,502	+		RR42_RS34095	0.39	+0.1
3,078,568	+		RR42_RS34095	0.48	-1.6
3,078,568	+		RR42_RS34095	0.48	+1.4
3,078,568	+		RR42_RS34095	0.48	-1.6
3,078,569	-		RR42_RS34095	0.48	+0.8
3,078,630	+		RR42_RS34095	0.57	+0.9
3,078,630	+		RR42_RS34095	0.57	+0.8
3,078,705	+		RR42_RS34095	0.68	-0.8
3,078,706	-		RR42_RS34095	0.68	-2.1
3,078,774	+		RR42_RS34095	0.77	-0.2
3,078,775	-		RR42_RS34095	0.78	-0.0
3,078,775	-		RR42_RS34095	0.78	-0.5
3,078,843	+		RR42_RS34095	0.87	+2.2
3,078,843	+		RR42_RS34095	0.87	+0.7
3,078,843	+		RR42_RS34095	0.87	-0.4
3,078,930	+				-1.6
3,078,930	+				-2.6
3,078,951	+				+0.8
3,078,954	-				-0.8
3,079,011	-				+0.4
3,079,011	-				+1.4
3,079,031	-				+0.1
3,079,031	-				-0.1
3,079,136	+		RR42_RS34100	0.11	+0.8
3,079,400	+		RR42_RS34100	0.28	-1.4
3,079,401	-		RR42_RS34100	0.28	-0.1
3,079,497	+		RR42_RS34100	0.34	-0.5
3,079,497	+		RR42_RS34100	0.34	-1.1
3,079,550	+		RR42_RS34100	0.38	+0.2
3,079,642	-		RR42_RS34100	0.44	-1.1
3,079,730	-		RR42_RS34100	0.49	-1.9
3,079,730	-		RR42_RS34100	0.49	+0.1
3,079,736	+		RR42_RS34100	0.50	-3.1
3,079,736	+		RR42_RS34100	0.50	+2.2
3,079,737	-		RR42_RS34100	0.50	+1.3
3,079,909	-		RR42_RS34100	0.61	-2.4